myRT

myRT report for GCA_013320955.1_ASM1332095v1

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Seq: JAAMCQ010000016.1 Agrobacterium rhizogenes strain Z4/95 Z4_95_2, whole genome shotgun sequence (959319 bp)
Overview 1 RT 1: 238934-242532 bp Neighborhood of RT #1 [238934, 242588] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 238934-239230 bp Feature: domain Description: Rve Location: 238961-239180 bp Feature: domain Description: Rve Location: 238961 -2391 80 bp Feature: gene Location: 239428-239604 bp Feature: gene Location: 239669-240973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239918-240575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23991 8-240575 bp Feature: domain Description: GIIM Note: maturase Location: 240656-240887 bp Feature: domain Description: GIIM Note: maturase Location: 240656-240887 bp Feature: gene Location: 241012-241497 bp Feature: domain Description: Rve Location: 241042-241423 bp Feature: domain Description: Rve Location: 241 042-241 423 bp Feature: gene Location: 241896-242588 bp Feature: domain Description: Crp Location: 241926-242532 bp Feature: domain Description: Crp Location: 241 926-242532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)

Seq: JAAMCQ010000005.1 Agrobacterium rhizogenes strain Z4/95 Z4_95_8, whole genome shotgun sequence (269524 bp)
Overview 1 RT 1: 45989-52267 bp Neighborhood of RT #1 [45989, 52267] DUF2235 HATPase_c_3 RVT-Retrons Dam Feature: gene Location: 45989-47101 bp Feature: domain Description: DUF2235 Location: 46010-46781 bp Feature: domain Description: DUF2 2 35 Location: 46010-46781 bp Feature: gene Location: 47376-49328 bp Feature: domain Description: HATPase_c_3 Location: 47445-47769 bp Feature: domain Description: HATPase_c_3 Location: 47445-47769 bp Feature: gene Location: 49382-51127 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49535-50171 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49535-50171 bp Feature: gene Location: 51410-52060 bp Feature: domain Description: Dam Location: 51437-51824 bp Feature: domain Description: Dam Location: 51437-5182 4 bp Feature: gene Location: 52052-52267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2235 (pfam09994), HATPase_c_3 (pfam13589), RVT-Retrons, Dam (pfam05869)