myRT

myRT report for GCA_013320995.1_ASM1332099v1

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Seq: JAAMCU010000020.1 Agrobacterium rhizogenes strain W 1.1 W_1.1_11, whole genome shotgun sequence (250037 bp)
Overview 1 RT 1: 238862-242460 bp Neighborhood of RT #1 [238862, 242516] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 238862-239158 bp Feature: domain Description: Rve Location: 238889-239108 bp Feature: domain Description: Rve Location: 238889-2391 08 bp Feature: gene Location: 239356-239532 bp Feature: gene Location: 239597-240901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239846-240503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239846-240503 bp Feature: domain Description: GIIM Note: maturase Location: 240584-240815 bp Feature: domain Description: GIIM Note: maturase Location: 240584-24081 5 bp Feature: gene Location: 240940-241425 bp Feature: domain Description: Rve Location: 240970-241348 bp Feature: domain Description: Rve Location: 240970-241 348 bp Feature: gene Location: 241824-242516 bp Feature: domain Description: Crp Location: 241854-242460 bp Feature: domain Description: Crp Location: 241 854-242460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)

Seq: JAAMCU010000006.1 Agrobacterium rhizogenes strain W 1.1 W_1.1_9, whole genome shotgun sequence (327514 bp)
Overview 1 RT 1: 155475-159758 bp Neighborhood of RT #1 [155475, 159799] HTH_XRE RVT-Retrons Trypsin_2 PRK01229 Nitroreductase Feature: gene Location: 155475-155792 bp Feature: domain Description: HTH_XRE Location: 155586-155730 bp Feature: domain Description: HTH_XRE Location: 155586-155730 bp Feature: gene Location: 156140-156280 bp Feature: gene Location: 156513-158111 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156675-157272 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156675-1572 72 bp Feature: domain Description: Trypsin_2 Location: 157620-158031 bp Feature: domain Description: Trypsin_2 Location: 15762 0-158031 bp Feature: gene Location: 158351-159124 bp Feature: domain Description: PRK01229 Location: 158534-159047 bp Feature: domain Description: PRK012 2 9 Location: 158534-159047 bp Feature: gene Location: 159131-159799 bp Feature: domain Description: Nitroreductase Location: 159257-159758 bp Feature: domain Description: Nitroreductase Location: 1592 57-159758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, Trypsin_2 (pfam13365), PRK01229 (N-glycosylase/DNA lyase; Provisional), Nitroreductase (pfam00881)