myRT

myRT report for GCA_013321005.1_ASM1332100v1

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Seq: JAAMCV010000014.1 Agrobacterium rhizogenes strain U167/95 U167_95_1, whole genome shotgun sequence (967195 bp)
Overview 1 RT 1: 238897-242495 bp Neighborhood of RT #1 [238897, 242551] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 238897-239193 bp Feature: domain Description: Rve Location: 238924-239143 bp Feature: domain Description: Rve Location: 238924-2391 43 bp Feature: gene Location: 239391-239567 bp Feature: gene Location: 239677-240867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239881-240538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239881 -240538 bp Feature: domain Description: GIIM Note: maturase Location: 240619-240850 bp Feature: domain Description: GIIM Note: maturase Location: 24061 9-240850 bp Feature: gene Location: 240975-241460 bp Feature: domain Description: Rve Location: 241005-241386 bp Feature: domain Description: Rve Location: 241 005-241 386 bp Feature: gene Location: 241859-242551 bp Feature: domain Description: Crp Location: 241889-242495 bp Feature: domain Description: Crp Location: 241 889-242495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)

Seq: JAAMCV010000007.1 Agrobacterium rhizogenes strain U167/95 U167_95_5, whole genome shotgun sequence (560952 bp)
Overview 1 RT 1: 546359-557824 bp Neighborhood of RT #1 [546359, 560763] Tra5 dnaG RVT-UG10 RVT-UG10 AAA Feature: gene Location: 546359-547285 bp Feature: domain Description: Tra5 Location: 546416-547166 bp Feature: domain Description: Tra5 Location: 546416-547166 bp Feature: gene Location: 547322-547567 bp Feature: gene Location: 548569-556002 bp Feature: domain Description: dnaG Location: 548587-549748 bp Feature: domain Description: dnaG Location: 548587-549748 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 550459-550618 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 550459-550618 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 550807-551077 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 550807-551077 bp Feature: gene Location: 557146-560763 bp Feature: domain Description: AAA Location: 557275-557824 bp Feature: domain Description: AAA Location: 5572 75-55782 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), dnaG (TIGR01391), RVT-UG10, AAA (TIGR00769)