myRT

myRT report for GCA_013321255.1_ASM1332125v1

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Seq: JAAMDI010000007.1 Agrobacterium rhizogenes strain NCIB 8196 NCIB_8196_2, whole genome shotgun sequence (598950 bp)
Overview 1 RT 1: 584228-588808 bp Neighborhood of RT #1 [584228, 588843] RVT-Retrons MTES_1575 Feature: gene Location: 584228-584590 bp Feature: gene Location: 584600-584866 bp Feature: gene Location: 585171-586886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 585306-585939 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 585306-585939 bp Feature: gene Location: 587332-587694 bp Feature: gene Location: 588004-588843 bp Feature: domain Description: MTES_1575 Location: 588601-588808 bp Feature: domain Description: MTES_1 575 Location: 588601 -588808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MTES_1575 (pfam18741)

Seq: JAAMDI010000031.1 Agrobacterium rhizogenes strain NCIB 8196 NCIB_8196_5, whole genome shotgun sequence (466686 bp)
Overview 1 RT 1: 238862-242460 bp Neighborhood of RT #1 [238862, 242516] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 238862-239158 bp Feature: domain Description: Rve Location: 238889-239108 bp Feature: domain Description: Rve Location: 2 38889-2 39108 bp Feature: gene Location: 239356-239532 bp Feature: gene Location: 239597-240901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239846-240503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 39846-2 40503 bp Feature: domain Description: GIIM Note: maturase Location: 240584-240815 bp Feature: domain Description: GIIM Note: maturase Location: 2 40584-2 40815 bp Feature: gene Location: 240940-241425 bp Feature: domain Description: Rve Location: 240970-241348 bp Feature: domain Description: Rve Location: 2 40970-2 41348 bp Feature: gene Location: 241824-242516 bp Feature: domain Description: Crp Location: 241854-242460 bp Feature: domain Description: Crp Location: 2 41854-2 42 460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)