myRT

myRT report for GCA_013321375.1_ASM1332137v1

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Seq: JAAMDP010000016.1 Agrobacterium rhizogenes strain K27 K27_2, whole genome shotgun sequence (959459 bp)
Overview 1 RT 1: 239074-242672 bp Neighborhood of RT #1 [239074, 242728] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 239074-239370 bp Feature: domain Description: Rve Location: 239101-239320 bp Feature: domain Description: Rve Location: 2391 01 -239320 bp Feature: gene Location: 239568-239744 bp Feature: gene Location: 239809-241113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240058-240715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240058-24071 5 bp Feature: domain Description: GIIM Note: maturase Location: 240796-241027 bp Feature: domain Description: GIIM Note: maturase Location: 240796-241 027 bp Feature: gene Location: 241152-241637 bp Feature: domain Description: Rve Location: 241182-241563 bp Feature: domain Description: Rve Location: 241 1 82-241 563 bp Feature: gene Location: 242036-242728 bp Feature: domain Description: Crp Location: 242066-242672 bp Feature: domain Description: Crp Location: 242066-242672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)

Seq: JAAMDP010000006.1 Agrobacterium rhizogenes strain K27 K27_9, whole genome shotgun sequence (269692 bp)
Overview 1 RT 1: 46157-52435 bp Neighborhood of RT #1 [46157, 52435] DUF2235 HATPase_c_3 RVT-Retrons Dam Feature: gene Location: 46157-47269 bp Feature: domain Description: DUF2235 Location: 46178-46949 bp Feature: domain Description: DUF2 2 35 Location: 46178-46949 bp Feature: gene Location: 47544-49496 bp Feature: domain Description: HATPase_c_3 Location: 47613-47937 bp Feature: domain Description: HATPase_c_3 Location: 47613-47937 bp Feature: gene Location: 49550-51295 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49703-50339 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49703-50339 bp Feature: gene Location: 51578-52228 bp Feature: domain Description: Dam Location: 51605-51992 bp Feature: domain Description: Dam Location: 51605-51992 bp Feature: gene Location: 52220-52435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2235 (pfam09994), HATPase_c_3 (pfam13589), RVT-Retrons, Dam (pfam05869)