myRT

myRT report for GCA_013321505.1_ASM1332150v1

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Seq: JAAMDA010000018.1 Agrobacterium rhizogenes strain RO 11.4 RO_11.4_2, whole genome shotgun sequence (963687 bp)
Overview 1 RT 1: 239129-242727 bp Neighborhood of RT #1 [239129, 242783] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 239129-239425 bp Feature: domain Description: Rve Location: 239156-239375 bp Feature: domain Description: Rve Location: 2391 56-239375 bp Feature: gene Location: 239623-239799 bp Feature: gene Location: 239864-241168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240113-240770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2401 1 3-240770 bp Feature: domain Description: GIIM Note: maturase Location: 240851-241082 bp Feature: domain Description: GIIM Note: maturase Location: 240851 -241 082 bp Feature: gene Location: 241207-241692 bp Feature: domain Description: Rve Location: 241237-241615 bp Feature: domain Description: Rve Location: 241 237-241 61 5 bp Feature: gene Location: 242091-242783 bp Feature: domain Description: Crp Location: 242121-242727 bp Feature: domain Description: Crp Location: 2421 21 -242727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)

Seq: JAAMDA010000021.1 Agrobacterium rhizogenes strain RO 11.4 RO_11.4_4, whole genome shotgun sequence (594124 bp)
Overview 1 RT 1: 340435-342621 bp Neighborhood of RT #1 [340435, 342621] DDE_Tnp_IS240 Rve RVT-GII Feature: gene Location: 340435-341073 bp Feature: domain Description: DDE_Tnp_IS240 Location: 340441-340678 bp Feature: domain Description: DDE_Tnp_IS2 40 Location: 340441-340678 bp Feature: gene Location: 341083-341352 bp Feature: domain Description: Rve Location: 341092-341341 bp Feature: domain Description: Rve Location: 341092 -341341 bp Feature: gene Location: 341333-342289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341744-342284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341744-342 2 84 bp Feature: gene Location: 342059-342268 bp Feature: gene Location: 342286-342621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS240 (pfam13610), Rve (COG3316), RVT-GII