myRT

myRT report for GCA_013321615.1_ASM1332161v1

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Seq: JAAMDX010000001.1 Agrobacterium rhizogenes strain D2/76 D2_76_10, whole genome shotgun sequence (149363 bp)
Overview 1 RT 1: 2-2541 bp Neighborhood of RT #1 [2, 2541] RVT-UG17 dCTP_deam Feature: gene Location: 2-820 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 104-314 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 04-31 4 bp Feature: gene Location: 903-1514 bp Feature: domain Description: dCTP_deam Location: 915-1461 bp Feature: domain Description: dCTP_deam Location: 91 5-1 461 bp Feature: gene Location: 1501-2541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, dCTP_deam (TIGR02274)

Seq: JAAMDX010000012.1 Agrobacterium rhizogenes strain D2/76 D2_76_18, whole genome shotgun sequence (18367 bp)
Overview 1 RT 1: 16703-18271 bp Neighborhood of RT #1 [16703, 18315] SLATT_5 RVT-UG17 Feature: gene Location: 16703-16906 bp Feature: gene Location: 17068-17655 bp Feature: domain Description: SLATT_5 Location: 17089-17626 bp Feature: domain Description: SLATT_5 Location: 17089-1762 6 bp Feature: gene Location: 17659-18315 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17887-18271 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17887-182 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: JAAMDX010000017.1 Agrobacterium rhizogenes strain D2/76 D2_76_2, whole genome shotgun sequence (964423 bp)
Overview 1 RT 1: 239832-243430 bp Neighborhood of RT #1 [239832, 243486] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 239832-240128 bp Feature: domain Description: Rve Location: 239859-240078 bp Feature: domain Description: Rve Location: 23 9859-240078 bp Feature: gene Location: 240326-240502 bp Feature: gene Location: 240567-241871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240816-241473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240816-241473 bp Feature: domain Description: GIIM Note: maturase Location: 241554-241785 bp Feature: domain Description: GIIM Note: maturase Location: 241554-241785 bp Feature: gene Location: 241910-242395 bp Feature: domain Description: Rve Location: 241940-242321 bp Feature: domain Description: Rve Location: 241940-2423 21 bp Feature: gene Location: 242794-243486 bp Feature: domain Description: Crp Location: 242824-243430 bp Feature: domain Description: Crp Location: 242824-243 43 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)