myRT

myRT report for GCA_013321805.1_ASM1332180v1

Download annotations/find similar RTs

Seq: JAAMEH010000018.1 Agrobacterium rhizogenes strain CG101/95 CG101_95_1, whole genome shotgun sequence (1072544 bp)
Overview 1 RT 1: 347998-351596 bp Neighborhood of RT #1 [347998, 351652] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 347998-348294 bp Feature: domain Description: Rve Location: 348025-348244 bp Feature: domain Description: Rve Location: 348025-348244 bp Feature: gene Location: 348492-348668 bp Feature: gene Location: 348733-350037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348982-349639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348982-349639 bp Feature: domain Description: GIIM Note: maturase Location: 349720-349951 bp Feature: domain Description: GIIM Note: maturase Location: 349720-349951 bp Feature: gene Location: 350076-350561 bp Feature: domain Description: Rve Location: 350106-350487 bp Feature: domain Description: Rve Location: 3501 06-350487 bp Feature: gene Location: 350960-351652 bp Feature: domain Description: Crp Location: 350990-351596 bp Feature: domain Description: Crp Location: 350990-351 596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)

Seq: JAAMEH010000002.1 Agrobacterium rhizogenes strain CG101/95 CG101_95_3, whole genome shotgun sequence (890884 bp)
Overview 1 RT 1: 597107-600307 bp Neighborhood of RT #1 [597107, 600312] DUF5131 RVT-DGRs PHA00652 Feature: gene Location: 597107-597460 bp Feature: gene Location: 597460-598575 bp Feature: domain Description: DUF5131 Location: 597475-598543 bp Feature: domain Description: DUF5131 Location: 597475-598543 bp Feature: gene Location: 598568-599560 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 598733-599324 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 598733-59932 4 bp Feature: gene Location: 599688-599858 bp Feature: gene Location: 599935-600312 bp Feature: domain Description: PHA00652 Location: 599968-600307 bp Feature: domain Description: PHA00652 Location: 599968-600307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5131 (pfam07505), RVT-DGRs, PHA00652 (hypothetical protein)