myRT

myRT report for GCA_013322175.1_ASM1332217v1

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Seq: JAAMEY010000014.1 Agrobacterium rhizogenes strain A 13.1 A_13.1_2, whole genome shotgun sequence (930419 bp)
Overview 1 RT 1: 239230-242828 bp Neighborhood of RT #1 [239230, 242884] Rve RVT-GII GIIM Rve Crp Feature: gene Location: 239230-239526 bp Feature: domain Description: Rve Location: 239257-239476 bp Feature: domain Description: Rve Location: 239257-239476 bp Feature: gene Location: 239724-239900 bp Feature: gene Location: 239965-241269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240214-240871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24021 4-240871 bp Feature: domain Description: GIIM Note: maturase Location: 240952-241183 bp Feature: domain Description: GIIM Note: maturase Location: 240952-241 1 83 bp Feature: gene Location: 241308-241793 bp Feature: domain Description: Rve Location: 241338-241719 bp Feature: domain Description: Rve Location: 241 338-241 71 9 bp Feature: gene Location: 242192-242884 bp Feature: domain Description: Crp Location: 242222-242828 bp Feature: domain Description: Crp Location: 242222-242828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), Crp (pfam00325)

Seq: JAAMEY010000026.1 Agrobacterium rhizogenes strain A 13.1 A_13.1_20, whole genome shotgun sequence (32115 bp)
Overview 1 RT 1: 8447-12709 bp Neighborhood of RT #1 [8447, 12771] Nitroreductase PRK01229 RVT-Retrons Trypsin_2 HTH_XRE Feature: gene Location: 8447-9115 bp Feature: domain Description: Nitroreductase Location: 8573-9074 bp Feature: domain Description: Nitroreductase Location: 8573-9074 bp Feature: gene Location: 9122-9925 bp Feature: domain Description: PRK01229 Location: 9335-9848 bp Feature: domain Description: PRK012 2 9 Location: 9335-9848 bp Feature: gene Location: 10135-11733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10297-10894 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102 97-10894 bp Feature: domain Description: Trypsin_2 Location: 11242-11653 bp Feature: domain Description: Trypsin_2 Location: 112 42 -11653 bp Feature: gene Location: 11966-12106 bp Feature: gene Location: 12454-12771 bp Feature: domain Description: HTH_XRE Location: 12565-12709 bp Feature: domain Description: HTH_XRE Location: 12 565-12 709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), HTH_XRE (smart00530), Nitroreductase (pfam00881), PRK01229 (N-glycosylase/DNA lyase; Provisional)