myRT

myRT report for GCA_013329165.1_ASM1332916v1

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Seq: DUKV01000028.1 TPA_asm: Methanocalculus sp. isolate UBA9912 contig_2565, whole genome shotgun sequence (16120 bp)
Overview 1 RT 1: 11393-15894 bp Neighborhood of RT #1 [11393, 16118] GT4_PimA-like archaeo_STT3 RVT-GII GIIM Feature: gene Location: 11393-12568 bp Feature: domain Description: GT4_PimA-like Location: 11411-12383 bp Feature: domain Description: GT4_PimA-like Location: 1 1 41 1 -1 2383 bp Feature: gene Location: 12609-15245 bp Feature: domain Description: archaeo_STT3 Location: 12675-15234 bp Feature: domain Description: archaeo_STT3 Location: 1 2675-1 5234 bp Feature: gene Location: 15384-16118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15420-15609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5420-1 5609 bp Feature: domain Description: GIIM Note: maturase Location: 15666-15894 bp Feature: domain Description: GIIM Note: maturase Location: 1 5666-1 5894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), archaeo_STT3 (TIGR04154), RVT-GII, GIIM (pfam08388)

Seq: DUKV01000038.1 TPA_asm: Methanocalculus sp. isolate UBA9912 contig_3985, whole genome shotgun sequence (36211 bp)
Overview 1 RT 1: 33510-35836 bp Neighborhood of RT #1 [33510, 36054] RVT_N RVT-GII GIIM Feature: gene Location: 33510-33674 bp Feature: gene Location: 34052-34210 bp Feature: gene Location: 34573-36054 bp Feature: RT Description: RVT_N Location: 34642-34885 bp Feature: RT Description: RVT_N Location: 34642 -34885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34930-35551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34930-35551 bp Feature: domain Description: GIIM Note: maturase Location: 35602-35836 bp Feature: domain Description: GIIM Note: maturase Location: 35602 -35836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)