myRT

myRT report for GCA_013334485.1_ASM1333448v1

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Seq: JAAXXL010000053.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_105 W9_Combined_metabat2_105_NODE_1748, whole genome shotgun sequence (17441 bp)
Overview 1 RT 1: 2365-7418 bp Neighborhood of RT #1 [2365, 7555] Methyltransf_25 RVT_N RVT-GII GIIM HTH_Tnp_1 HTH_Tnp_1 HTH_23 Tra5 Feature: gene Location: 2365-3087 bp Feature: gene Location: 3110-3940 bp Feature: domain Description: Methyltransf_25 Location: 3254-3524 bp Feature: domain Description: Methyltransf_25 Location: 3254-3524 bp Feature: gene Location: 4463-5956 bp Feature: RT Description: RVT_N Location: 4508-4751 bp Feature: RT Description: RVT_N Location: 4508-4751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4796-5432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4796-5432 bp Feature: domain Description: GIIM Note: maturase Location: 5486-5717 bp Feature: domain Description: GIIM Note: maturase Location: 5486-571 7 bp Feature: gene Location: 6054-6539 bp Feature: domain Description: HTH_Tnp_1 Location: 6063-6207 bp Feature: domain Description: HTH_Tnp_1 Location: 6063-6207 bp Feature: domain Description: HTH_Tnp_1 Location: 6312-6447 bp Feature: domain Description: HTH_Tnp_1 Location: 631 2-6447 bp Feature: gene Location: 6572-7555 bp Feature: domain Description: HTH_23 Location: 6593-6665 bp Feature: domain Description: HTH_23 Location: 6593-6665 bp Feature: domain Description: Tra5 Location: 6719-7418 bp Feature: domain Description: Tra5 Location: 671 9-741 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527), HTH_23 (pfam13384), Tra5 (COG2801)

Seq: JAAXXL010000023.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_105 W9_Combined_metabat2_105_NODE_636, whole genome shotgun sequence (36400 bp)
Overview 1 RT 1: 3-4559 bp Neighborhood of RT #1 [3, 4559] RVT-DGRs COG5635 pfam03781 Feature: gene Location: 3-128 bp Feature: gene Location: 295-1332 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 505-1144 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 505-1144 bp Feature: gene Location: 1361-4345 bp Feature: domain Description: COG5635 Location: 2018-3209 bp Feature: domain Description: COG5635 Location: 2 018-32 09 bp Feature: domain Description: pfam03781 Location: 3599-4322 bp Feature: domain Description: pfam03781 Location: 3599-432 2 bp Feature: gene Location: 4398-4559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs