myRT

myRT report for GCA_013334725.1_ASM1333472v1

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Seq: JAAXWZ010000351.1 Chlorobiales bacterium isolate W9_Combined_metabat2_051 W9_Combined_metabat2_051_NODE_26488, whole genome shotgun sequence (3300 bp)
Overview 1 RT 1: 2-3299 bp Neighborhood of RT #1 [2, 3299] PfkB RVT-GII Feature: gene Location: 2-1003 bp Feature: domain Description: PfkB Location: 200-995 bp Feature: domain Description: PfkB Location: 200-995 bp Feature: gene Location: 1094-2428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1379-2066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 379-2066 bp Feature: gene Location: 2586-2783 bp Feature: gene Location: 2994-3299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PfkB (pfam00294), RVT-GII

Seq: JAAXWZ010000396.1 Chlorobiales bacterium isolate W9_Combined_metabat2_051 W9_Combined_metabat2_051_NODE_32490, whole genome shotgun sequence (2980 bp)
Overview 1 RT 1: 2-2977 bp Neighborhood of RT #1 [2, 2977] group_II_RT_mat RVT-UG6 Feature: gene Location: 2-2176 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 35-359 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 35-359 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 632-1070 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 632 -1070 bp Feature: gene Location: 2173-2679 bp Feature: gene Location: 2828-2977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG6

Seq: JAAXWZ010000064.1 Chlorobiales bacterium isolate W9_Combined_metabat2_051 W9_Combined_metabat2_051_NODE_6512, whole genome shotgun sequence (7156 bp)
Overview 1 RT 1: 3577-6153 bp Neighborhood of RT #1 [3577, 7154] PHP_HisPPase_AMP RVT-Retrons Feature: gene Location: 3577-3933 bp Feature: gene Location: 4183-5040 bp Feature: domain Description: PHP_HisPPase_AMP Location: 4228-4951 bp Feature: domain Description: PHP_HisPPase_AMP Location: 4228-4951 bp Feature: gene Location: 5352-7154 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5553-6153 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5553 -6153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHP_HisPPase_AMP (cd07438), RVT-Retrons

Seq: JAAXWZ010000100.1 Chlorobiales bacterium isolate W9_Combined_metabat2_051 W9_Combined_metabat2_051_NODE_8599, whole genome shotgun sequence (6051 bp)
Overview 1 RT 1: 3-3955 bp Neighborhood of RT #1 [3, 3987] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Cas1_I-II-III Feature: gene Location: 3-320 bp Feature: gene Location: 404-2638 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 671-1277 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 671-1277 bp Feature: domain Description: Cas1_I-II-III Location: 1619-2603 bp Feature: domain Description: Cas1_I-II-III Location: 1619-2603 bp Feature: gene Location: 2662-2937 bp Feature: domain Description: Cas2_I_II_III Location: 2674-2902 bp Feature: domain Description: Cas2_I_II_III Location: 2674 -2902 bp Feature: gene Location: 2941-3987 bp Feature: domain Description: Cas1_I-II-III Location: 2968-3955 bp Feature: domain Description: Cas1_I-II-III Location: 2968-3955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)