myRT

myRT report for GCA_013334855.1_ASM1333485v1

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Seq: JAAXWU010000164.1 Chlorobaculum sp. isolate W9_Combined_metabat2_041 W9_Combined_metabat2_041_NODE_17791, whole genome shotgun sequence (4056 bp)
Overview 1 RT 1: 162-2101 bp Neighborhood of RT #1 [162, 2121] RVT-AbiP2 COG3865 Feature: gene Location: 162-1007 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 165-375 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 65-375 bp Feature: gene Location: 1011-1298 bp Feature: gene Location: 1636-2121 bp Feature: domain Description: COG3865 Location: 1648-2101 bp Feature: domain Description: COG3865 Location: 1 648-21 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, COG3865 (Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase )

Seq: JAAXWU010000051.1 Chlorobaculum sp. isolate W9_Combined_metabat2_041 W9_Combined_metabat2_041_NODE_1792, whole genome shotgun sequence (17116 bp)
Overview 1 RT 1: 4275-11786 bp Neighborhood of RT #1 [4275, 11791] Mfd Mfd RVT-UG7 DppD Feature: gene Location: 4275-7580 bp Feature: domain Description: Mfd Location: 4596-4962 bp Feature: domain Description: Mfd Location: 4596-4962 bp Feature: domain Description: Mfd Location: 5160-7371 bp Feature: domain Description: Mfd Location: 5160-7371 bp Feature: gene Location: 7889-8719 bp Feature: gene Location: 8838-10067 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 9252-9666 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 92 52 -9666 bp Feature: gene Location: 10449-10643 bp Feature: gene Location: 10826-11791 bp Feature: domain Description: DppD Location: 10838-11786 bp Feature: domain Description: DppD Location: 10838-11786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mfd (COG1197), RVT-UG7, DppD (COG0444)

Seq: JAAXWU010000082.1 Chlorobaculum sp. isolate W9_Combined_metabat2_041 W9_Combined_metabat2_041_NODE_4481, whole genome shotgun sequence (9080 bp)
Overview 1 RT 1: 2179-9019 bp Neighborhood of RT #1 [2179, 9078] CspC RVT-GII PEP-CTERM RVT-UG13 DUF3124 KefB Feature: gene Location: 2179-2448 bp Feature: domain Description: CspC Location: 2254-2443 bp Feature: domain Description: CspC Location: 2254-2443 bp Feature: gene Location: 2458-2754 bp Feature: gene Location: 3005-4117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3329-3893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 29-3 893 bp Feature: gene Location: 4212-4454 bp Feature: gene Location: 4496-5176 bp Feature: domain Description: PEP-CTERM Location: 5078-5153 bp Feature: domain Description: PEP-CTERM Location: 5078-5153 bp Feature: gene Location: 5436-5771 bp Feature: gene Location: 5946-6131 bp Feature: gene Location: 6146-7513 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 6551-7019 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 6551-7019 bp Feature: gene Location: 7729-8223 bp Feature: domain Description: DUF3124 Location: 7840-8206 bp Feature: domain Description: DUF3 124 Location: 7840-8206 bp Feature: gene Location: 8248-9078 bp Feature: domain Description: KefB Location: 8257-9019 bp Feature: domain Description: KefB Location: 8257-9019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-GII, PEP-CTERM, RVT-UG13, DUF3124 (pfam11322), KefB (COG0475)

Seq: JAAXWU010000108.1 Chlorobaculum sp. isolate W9_Combined_metabat2_041 W9_Combined_metabat2_041_NODE_7219, whole genome shotgun sequence (6725 bp)
Overview 1 RT 1: 2-4039 bp Neighborhood of RT #1 [2, 4044] RVT-GII RVT-GII GIIM chlL DPOR_BchB Feature: gene Location: 2-1060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737-908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737-908 bp Feature: domain Description: GIIM Note: maturase Location: 959-1058 bp Feature: domain Description: GIIM Note: maturase Location: 959-1058 bp Feature: gene Location: 1459-2325 bp Feature: domain Description: chlL Location: 1498-2320 bp Feature: domain Description: chlL Location: 14 98-2320 bp Feature: gene Location: 2422-4044 bp Feature: domain Description: DPOR_BchB Location: 2425-4039 bp Feature: domain Description: DPOR_BchB Location: 24 25-4 039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), chlL (PRK13185), DPOR_BchB (TIGR01278)

Seq: JAAXWU010000112.1 Chlorobaculum sp. isolate W9_Combined_metabat2_041 W9_Combined_metabat2_041_NODE_7593, whole genome shotgun sequence (6519 bp)
Overview 1 RT 1: 4569-6501 bp Neighborhood of RT #1 [4569, 6518] RelE DEDDh RVT-AbiP2 zf-ISL3 Feature: gene Location: 4569-4739 bp Feature: domain Description: RelE Location: 4578-4737 bp Feature: domain Description: RelE Location: 45 78-4737 bp Feature: gene Location: 4849-5415 bp Feature: domain Description: DEDDh Location: 4870-5392 bp Feature: domain Description: DEDDh Location: 4870-5 392 bp Feature: gene Location: 5507-6181 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5939-6152 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5 939-615 2 bp Feature: gene Location: 6240-6518 bp Feature: domain Description: zf-ISL3 Location: 6372-6501 bp Feature: domain Description: zf-ISL3 Location: 6372-65 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), DEDDh (cd06127), RVT-AbiP2, zf-ISL3 (pfam14690)

Seq: JAAXWU010000022.1 Chlorobaculum sp. isolate W9_Combined_metabat2_041 W9_Combined_metabat2_041_NODE_981, whole genome shotgun sequence (26930 bp)
Overview 1 RT 1: 12639-16018 bp Neighborhood of RT #1 [12639, 16018] RVT-CRISPR Cas1_I-II-III Feature: gene Location: 12639-12773 bp Feature: gene Location: 12950-13102 bp Feature: gene Location: 13263-15500 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13515-14121 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 13515-14121 bp Feature: domain Description: Cas1_I-II-III Location: 14475-15456 bp Feature: domain Description: Cas1_I-II-III Location: 14475-15456 bp Feature: gene Location: 15614-15778 bp Feature: gene Location: 15782-16018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656)