myRT

myRT report for GCA_013334975.1_ASM1333497v1

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Seq: JAAXWL010000045.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_016 W9_Combined_metabat2_016_NODE_1458, whole genome shotgun sequence (19922 bp)
Overview 1 RT 1: 3-2824 bp Neighborhood of RT #1 [3, 2832] RVT-GII RVT-GII GIIM RecD DUF3018 Feature: gene Location: 3-293 bp Feature: gene Location: 321-584 bp Feature: gene Location: 799-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961-1336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961 -1 336 bp Feature: gene Location: 1360-2031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1363-1654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 363-1 654 bp Feature: domain Description: GIIM Note: maturase Location: 1738-1948 bp Feature: domain Description: GIIM Note: maturase Location: 1 738-1 948 bp Feature: gene Location: 2321-2542 bp Feature: domain Description: RecD Location: 2411-2489 bp Feature: domain Description: RecD Location: 241 1 -2489 bp Feature: gene Location: 2650-2832 bp Feature: domain Description: DUF3018 Location: 2662-2824 bp Feature: domain Description: DUF301 8 Location: 2662-2824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RecD (COG0507), DUF3018 (pfam11455)

Seq: JAAXWL010000154.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_016 W9_Combined_metabat2_016_NODE_16713, whole genome shotgun sequence (4195 bp)
Overview 1 RT 1: 1040-3728 bp Neighborhood of RT #1 [1040, 3748] RVT-GII GIIM RVT-GII IbpA Gp49 Feature: gene Location: 1040-1195 bp Feature: gene Location: 1446-1679 bp Feature: gene Location: 1738-2274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1741-1873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1741-1873 bp Feature: domain Description: GIIM Note: maturase Location: 1951-2173 bp Feature: domain Description: GIIM Note: maturase Location: 1951-2 173 bp Feature: gene Location: 2271-2756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2274-2697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 74-2 697 bp Feature: gene Location: 2882-3310 bp Feature: domain Description: IbpA Location: 2918-3305 bp Feature: domain Description: IbpA Location: 2 918-3305 bp Feature: gene Location: 3503-3748 bp Feature: domain Description: Gp49 Location: 3515-3728 bp Feature: domain Description: Gp49 Location: 3515-372 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IbpA (COG0071), Gp49 (pfam05973)

Seq: JAAXWL010000003.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_016 W9_Combined_metabat2_016_NODE_228, whole genome shotgun sequence (67454 bp)
Overview 1 RT 1: 30872-33737 bp Neighborhood of RT #1 [30872, 33737] IceA2 RVT_N RVT-GII GIIM Feature: gene Location: 30872-31156 bp Feature: domain Description: IceA2 Location: 30875-31031 bp Feature: domain Description: IceA2 Location: 3 0875-3 103 1 bp Feature: gene Location: 31315-31488 bp Feature: gene Location: 31617-33107 bp Feature: domain Description: RVT_N Location: 31662-31905 bp Feature: domain Description: RVT_N Location: 3 1662-3 1905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31950-32586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1950-3 2586 bp Feature: domain Description: GIIM Note: maturase Location: 32637-32871 bp Feature: domain Description: GIIM Note: maturase Location: 3 263 7-3 2871 bp Feature: gene Location: 33305-33472 bp Feature: gene Location: 33495-33737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IceA2 (pfam05862), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAXWL010000088.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_016 W9_Combined_metabat2_016_NODE_3003, whole genome shotgun sequence (11845 bp)
Overview 1 RT 1: 10515-11451 bp Neighborhood of RT #1 [10515, 11843] Unstab_antitox RVT-GII Feature: gene Location: 10515-10736 bp Feature: domain Description: Unstab_antitox Location: 10557-10716 bp Feature: domain Description: Unstab_antitox Location: 10557-10716 bp Feature: gene Location: 10924-11082 bp Feature: gene Location: 11178-11843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11190-11451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11190-114 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Unstab_antitox (pfam09720), RVT-GII

Seq: JAAXWL010000006.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_016 W9_Combined_metabat2_016_NODE_378, whole genome shotgun sequence (51178 bp)
Overview 1 RT 1: 36431-41255 bp Neighborhood of RT #1 [36431, 41296] Cytochrom_C3 Cytochrom_C3 Cytochrom_C3 RVT-GII COG1808 HTH_32 Feature: gene Location: 36431-37300 bp Feature: domain Description: Cytochrom_C3 Location: 36539-36743 bp Feature: domain Description: Cytochrom_C3 Location: 365 39-36743 bp Feature: domain Description: Cytochrom_C3 Location: 36764-37022 bp Feature: domain Description: Cytochrom_C3 Location: 36764-37022 bp Feature: domain Description: Cytochrom_C3 Location: 37040-37253 bp Feature: domain Description: Cytochrom_C3 Location: 37040-3725 3 bp Feature: gene Location: 37831-38076 bp Feature: gene Location: 38161-38601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38167-38470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38167-38470 bp Feature: gene Location: 39020-40489 bp Feature: domain Description: COG1808 Location: 39263-39851 bp Feature: domain Description: COG1808 Location: 39263-3985 1 bp Feature: gene Location: 40823-41296 bp Feature: domain Description: HTH_32 Location: 41015-41255 bp Feature: domain Description: HTH_32 Location: 41015 -4125 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cytochrom_C3 (cl23752), RVT-GII, COG1808 (Uncharacterized membrane protein ), HTH_32 (pfam13565)

Seq: JAAXWL010000022.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_016 W9_Combined_metabat2_016_NODE_754, whole genome shotgun sequence (32279 bp)
Overview 1 RT 1: 28497-32277 bp Neighborhood of RT #1 [28497, 32277] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Feature: gene Location: 28497-29045 bp Feature: gene Location: 29453-29737 bp Feature: domain Description: Cas2_I_II_III Location: 29465-29696 bp Feature: domain Description: Cas2_I_II_III Location: 2946 5-296 96 bp Feature: gene Location: 29786-31981 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 29996-30602 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 29996 -306 02 bp Feature: domain Description: Cas1_I-II-III Location: 30956-31937 bp Feature: domain Description: Cas1_I-II-III Location: 30956 -31937 bp Feature: gene Location: 32011-32277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)