myRT

myRT report for GCA_013334995.1_ASM1333499v1

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Seq: JAAXWN010000002.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_021 W9_Combined_metabat2_021_NODE_13, whole genome shotgun sequence (297431 bp)
Overview 1 RT 1: 224-3989 bp Neighborhood of RT #1 [224, 4009] HTH_21 RVT-GII RVT-GII GIIM rve_3 GT4_GT28_WabH-like Feature: gene Location: 224-595 bp Feature: domain Description: HTH_21 Location: 344-500 bp Feature: domain Description: HTH_21 Location: 344-500 bp Feature: gene Location: 716-1090 bp Feature: gene Location: 1087-1773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1285-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 285-1 71 1 bp Feature: gene Location: 1806-2330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1812-1944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 2-1 944 bp Feature: domain Description: GIIM Note: maturase Location: 2025-2244 bp Feature: domain Description: GIIM Note: maturase Location: 2025-2244 bp Feature: gene Location: 2311-2883 bp Feature: domain Description: rve_3 Location: 2632-2830 bp Feature: domain Description: rve_3 Location: 2632-2830 bp Feature: gene Location: 2900-4009 bp Feature: domain Description: GT4_GT28_WabH-like Location: 2930-3989 bp Feature: domain Description: GT4_GT28_WabH-like Location: 2930-3989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), rve_3 (pfam13683), GT4_GT28_WabH-like (cd03811)

Seq: JAAXWN010000014.1 Chlorobiaceae bacterium isolate W9_Combined_metabat2_021 W9_Combined_metabat2_021_NODE_427, whole genome shotgun sequence (47071 bp)
Overview 1 RT 1: 9621-15925 bp Neighborhood of RT #1 [9621, 15925] YiaG YiaG RVT-GII INT_IntI_C FRG COG3943 RVT-GII GIIM INT_IntI_C Feature: gene Location: 9621-9785 bp Feature: domain Description: YiaG Location: 9624-9756 bp Feature: domain Description: YiaG Location: 962 4-9756 bp Feature: gene Location: 10172-10327 bp Feature: domain Description: YiaG Location: 10175-10307 bp Feature: domain Description: YiaG Location: 10175-10307 bp Feature: gene Location: 10787-11101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10955-11099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10955-11099 bp Feature: gene Location: 11147-11335 bp Feature: domain Description: INT_IntI_C Location: 11168-11303 bp Feature: domain Description: INT_IntI_C Location: 11168-11303 bp Feature: gene Location: 11486-12373 bp Feature: domain Description: FRG Location: 11651-11972 bp Feature: domain Description: FRG Location: 11651-11972 bp Feature: gene Location: 12835-13896 bp Feature: domain Description: COG3943 Location: 12898-13870 bp Feature: domain Description: COG3943 Location: 12 898-13870 bp Feature: gene Location: 13976-14764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14123-14363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1412 3-14363 bp Feature: domain Description: GIIM Note: maturase Location: 14441-14648 bp Feature: domain Description: GIIM Note: maturase Location: 14441-14648 bp Feature: gene Location: 14810-14998 bp Feature: domain Description: INT_IntI_C Location: 14831-14963 bp Feature: domain Description: INT_IntI_C Location: 14831-14963 bp Feature: gene Location: 15152-15925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiaG (COG2944), RVT-GII, INT_IntI_C (cd01193), FRG (smart00901), COG3943 (Uncharacterized conserved protein ), GIIM (pfam08388)