myRT

myRT report for GCA_013336035.1_ASM1333603v1

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Seq: JAAXUL010000803.1 Chloroflexales bacterium isolate W4_Combined_metabat2_035 W4_Combined_metabat2_035_NODE_16719, whole genome shotgun sequence (4162 bp)
Overview 1 RT 1: 138-3890 bp Neighborhood of RT #1 [138, 4159] Transposase_20 Tra5 RVT-GII Intron_maturas2 HNHc rve_3 Feature: gene Location: 138-548 bp Feature: domain Description: Transposase_20 Location: 144-324 bp Feature: domain Description: Transposase_20 Location: 1 44-324 bp Feature: gene Location: 674-1525 bp Feature: domain Description: Tra5 Location: 824-1367 bp Feature: domain Description: Tra5 Location: 824-1 367 bp Feature: gene Location: 1886-3655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2147-2936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 47-2936 bp Feature: domain Description: Intron_maturas2 Location: 3026-3254 bp Feature: domain Description: Intron_maturas2 Location: 3026-3254 bp Feature: domain Description: HNHc Note: nucleases Location: 3434-3608 bp Feature: domain Description: HNHc Note: nucleases Location: 3434-3608 bp Feature: gene Location: 3728-4159 bp Feature: domain Description: rve_3 Location: 3761-3890 bp Feature: domain Description: rve_3 Location: 3761 -3890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), rve_3 (pfam13683), Tra5 (COG2801)

Seq: JAAXUL010000811.1 Chloroflexales bacterium isolate W4_Combined_metabat2_035 W4_Combined_metabat2_035_NODE_17119, whole genome shotgun sequence (4124 bp)
Overview 1 RT 1: 1006-4121 bp Neighborhood of RT #1 [1006, 4121] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1006-1821 bp Feature: gene Location: 1917-2195 bp Feature: gene Location: 2288-3601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2297-2870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 97-2 870 bp Feature: domain Description: Intron_maturas2 Location: 2966-3212 bp Feature: domain Description: Intron_maturas2 Location: 2 966-32 12 bp Feature: domain Description: HNHc Note: nucleases Location: 3386-3554 bp Feature: domain Description: HNHc Note: nucleases Location: 3386-3554 bp Feature: gene Location: 3759-4121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JAAXUL010000240.1 Chloroflexales bacterium isolate W4_Combined_metabat2_035 W4_Combined_metabat2_035_NODE_2531, whole genome shotgun sequence (9575 bp)
Overview 1 RT 1: 5776-9026 bp Neighborhood of RT #1 [5776, 9061] DDE_Tnp_1_6 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 5776-6294 bp Feature: gene Location: 6440-7222 bp Feature: domain Description: DDE_Tnp_1_6 Location: 6776-7142 bp Feature: domain Description: DDE_Tnp_1_6 Location: 6776-7142 bp Feature: gene Location: 7283-9061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7544-8339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7544-83 3 9 bp Feature: domain Description: Intron_maturas2 Location: 8441-8690 bp Feature: domain Description: Intron_maturas2 Location: 8441-8690 bp Feature: domain Description: HNHc Note: nucleases Location: 8858-9026 bp Feature: domain Description: HNHc Note: nucleases Location: 8858-9026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_6 (pfam13751), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JAAXUL010000477.1 Chloroflexales bacterium isolate W4_Combined_metabat2_035 W4_Combined_metabat2_035_NODE_6249, whole genome shotgun sequence (6399 bp)
Overview 1 RT 1: 2034-6375 bp Neighborhood of RT #1 [2034, 6398] zf-ISL3 DDE_Tnp_ISL3 RVT-GII Intron_maturas2 HNHc pfam03781 Feature: gene Location: 2034-2636 bp Feature: domain Description: zf-ISL3 Location: 2295-2421 bp Feature: domain Description: zf-ISL3 Location: 2295-24 21 bp Feature: gene Location: 2734-2964 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2743-2887 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 274 3-2887 bp Feature: gene Location: 3398-5215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3659-4454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3659-4 4 54 bp Feature: domain Description: Intron_maturas2 Location: 4562-4811 bp Feature: domain Description: Intron_maturas2 Location: 4 562-4 811 bp Feature: domain Description: HNHc Note: nucleases Location: 4979-5144 bp Feature: domain Description: HNHc Note: nucleases Location: 4 979-514 4 bp Feature: gene Location: 5319-6398 bp Feature: domain Description: pfam03781 Location: 5649-6375 bp Feature: domain Description: pfam03781 Location: 564 9-6375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-ISL3 (pfam14690), DDE_Tnp_ISL3 (pfam01610), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: JAAXUL010000558.1 Chloroflexales bacterium isolate W4_Combined_metabat2_035 W4_Combined_metabat2_035_NODE_8095, whole genome shotgun sequence (5698 bp)
Overview 1 RT 1: 2158-5656 bp Neighborhood of RT #1 [2158, 5697] P22_AR_N ORF6C RVT_N RVT-GII GIIM HNH Feature: gene Location: 2158-2658 bp Feature: gene Location: 2995-3885 bp Feature: domain Description: P22_AR_N Location: 3091-3334 bp Feature: domain Description: P22_AR_N Location: 3091-3334 bp Feature: domain Description: ORF6C Location: 3628-3820 bp Feature: domain Description: ORF6C Location: 3628-3820 bp Feature: gene Location: 4198-5697 bp Feature: RT Description: RVT_N Location: 4204-4282 bp Feature: RT Description: RVT_N Location: 4204-4282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4327-4966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4327-4966 bp Feature: domain Description: GIIM Note: maturase Location: 5035-5266 bp Feature: domain Description: GIIM Note: maturase Location: 5 035 -5 266 bp Feature: domain Description: HNH Note: nucleases Location: 5518-5656 bp Feature: domain Description: HNH Note: nucleases Location: 5 5 18-5 65 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P22_AR_N (pfam10547), ORF6C (pfam10552), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)