myRT

myRT report for GCA_013336715.1_ASM1333671v1

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Seq: JABUMT010000001.1 Myxococcus sp. CA056 NODE_1_length_1886394_cov_25.8197, whole genome shotgun sequence (1886394 bp)
Overview 1 RT 1: 485037-496003 bp 2 RT 2: 1534326-1547151 bp Neighborhood of RT #1 [485037, 496011] HEAT_2 HEAT HEAT_2 HEAT_2 Aldo_ket_red RVT-Retrons rpt_mate_G_obs LRR_RI RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 Neighborhood of RT #2 [1534326, 1547171] WD40 WD40 WD40 KOG0268 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DAP2 BetA BetA BetA Feature: gene Location: 485037-485669 bp Feature: gene Location: 485706-488972 bp Feature: domain Description: HEAT_2 Location: 485814-486063 bp Feature: domain Description: HEAT_2 Location: 48581 4-486063 bp Feature: domain Description: HEAT Location: 486099-486162 bp Feature: domain Description: HEAT Location: 486099-4861 62 bp Feature: domain Description: HEAT_2 Location: 486879-487116 bp Feature: domain Description: HEAT_2 Location: 486879-4871 1 6 bp Feature: domain Description: HEAT_2 Location: 487146-487479 bp Feature: domain Description: HEAT_2 Location: 4871 46-487479 bp Feature: domain Description: Aldo_ket_red Location: 488097-488820 bp Feature: domain Description: Aldo_ket_red Location: 488097-488820 bp Feature: gene Location: 489188-490606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 489788-490379 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 489788-490379 bp Feature: gene Location: 490603-491577 bp Feature: domain Description: rpt_mate_G_obs Location: 490615-490729 bp Feature: domain Description: rpt_mate_G_obs Location: 49061 5-490729 bp Feature: domain Description: LRR_RI Location: 491023-491509 bp Feature: domain Description: LRR_RI Location: 491 023-491 509 bp Feature: gene Location: 491647-496011 bp Feature: domain Description: RCC1 Location: 491857-491998 bp Feature: domain Description: RCC1 Location: 491 857-491 998 bp Feature: domain Description: RCC1 Location: 492016-492148 bp Feature: domain Description: RCC1 Location: 49201 6-4921 48 bp Feature: domain Description: RCC1 Location: 492157-492298 bp Feature: domain Description: RCC1 Location: 4921 57-492298 bp Feature: domain Description: RCC1 Location: 492307-492448 bp Feature: domain Description: RCC1 Location: 492307-492448 bp Feature: domain Description: RCC1 Location: 492457-492574 bp Feature: domain Description: RCC1 Location: 492457-492574 bp Feature: domain Description: RCC1 Location: 492607-492748 bp Feature: domain Description: RCC1 Location: 492607-492748 bp Feature: domain Description: RCC1 Location: 492757-492895 bp Feature: domain Description: RCC1 Location: 492757-492895 bp Feature: domain Description: RCC1 Location: 492907-493048 bp Feature: domain Description: RCC1 Location: 492907-493048 bp Feature: domain Description: RCC1 Location: 493057-493198 bp Feature: domain Description: RCC1 Location: 493057-4931 98 bp Feature: domain Description: RCC1 Location: 493207-493348 bp Feature: domain Description: RCC1 Location: 493207-493348 bp Feature: domain Description: RCC1 Location: 493357-493498 bp Feature: domain Description: RCC1 Location: 493357-493498 bp Feature: domain Description: RCC1 Location: 493507-493648 bp Feature: domain Description: RCC1 Location: 493507-493648 bp Feature: domain Description: RCC1 Location: 493657-493756 bp Feature: domain Description: RCC1 Location: 493657-493756 bp Feature: domain Description: RCC1 Location: 493807-493945 bp Feature: domain Description: RCC1 Location: 493807-493945 bp Feature: domain Description: RCC1 Location: 493957-494098 bp Feature: domain Description: RCC1 Location: 493957-494098 bp Feature: domain Description: RCC1 Location: 494107-494248 bp Feature: domain Description: RCC1 Location: 4941 07-494248 bp Feature: domain Description: RCC1 Location: 494257-494398 bp Feature: domain Description: RCC1 Location: 494257-494398 bp Feature: domain Description: RCC1 Location: 494407-494548 bp Feature: domain Description: RCC1 Location: 494407-494548 bp Feature: domain Description: RCC1 Location: 494557-494698 bp Feature: domain Description: RCC1 Location: 494557-494698 bp Feature: domain Description: RCC1 Location: 494707-494848 bp Feature: domain Description: RCC1 Location: 494707-494848 bp Feature: domain Description: RCC1 Location: 494872-495010 bp Feature: domain Description: RCC1 Location: 494872-49501 0 bp Feature: domain Description: RCC1 Location: 495022-495163 bp Feature: domain Description: RCC1 Location: 495022-4951 63 bp Feature: domain Description: RCC1 Location: 495172-495313 bp Feature: domain Description: RCC1 Location: 4951 72-49531 3 bp Feature: domain Description: RCC1 Location: 495322-495463 bp Feature: domain Description: RCC1 Location: 495322-495463 bp Feature: domain Description: RCC1 Location: 495472-495613 bp Feature: domain Description: RCC1 Location: 495472-49561 3 bp Feature: domain Description: RCC1 Location: 495622-495763 bp Feature: domain Description: RCC1 Location: 495622-495763 bp Feature: domain Description: RCC1 Location: 495772-495907 bp Feature: domain Description: RCC1 Location: 495772-495907 bp Feature: domain Description: RCC1 Location: 495916-496003 bp Feature: domain Description: RCC1 Location: 49591 6-496003 bp Feature: gene Location: 1534326-1540856 bp Feature: domain Description: WD40 Location: 1534590-1534686 bp Feature: domain Description: WD40 Location: 1 534590-1 534686 bp Feature: domain Description: WD40 Location: 1534704-1534806 bp Feature: domain Description: WD40 Location: 1 534704-1 534806 bp Feature: domain Description: WD40 Location: 1534848-1534935 bp Feature: domain Description: WD40 Location: 1 534848-1 534935 bp Feature: domain Description: KOG0268 Location: 1535034-1535277 bp Feature: domain Description: KOG0268 Location: 1 535034-1 535277 bp Feature: domain Description: HEAT_2 Location: 1535352-1535562 bp Feature: domain Description: HEAT_2 Location: 1 535352-1 535562 bp Feature: domain Description: HEAT_2 Location: 1536159-1536408 bp Feature: domain Description: HEAT_2 Location: 1 5361 59-1 536408 bp Feature: domain Description: HEAT_2 Location: 1536453-1536606 bp Feature: domain Description: HEAT_2 Location: 1 536453-1 536606 bp Feature: domain Description: HEAT_2 Location: 1536648-1536852 bp Feature: domain Description: HEAT_2 Location: 1 536648-1 536852 bp Feature: domain Description: HEAT Location: 1536912-1537209 bp Feature: domain Description: HEAT Location: 1 53691 2-1 537209 bp Feature: domain Description: HEAT_2 Location: 1537263-1537470 bp Feature: domain Description: HEAT_2 Location: 1 537263-1 537470 bp Feature: domain Description: HEAT_2 Location: 1538103-1538289 bp Feature: domain Description: HEAT_2 Location: 1 5381 03-1 538289 bp Feature: domain Description: HEAT_2 Location: 1538337-1538541 bp Feature: domain Description: HEAT_2 Location: 1 538337-1 538541 bp Feature: domain Description: HEAT_2 Location: 1538706-1538940 bp Feature: domain Description: HEAT_2 Location: 1 538706-1 538940 bp Feature: domain Description: HEAT_2 Location: 1539525-1539768 bp Feature: domain Description: HEAT_2 Location: 1 539525-1 539768 bp Feature: domain Description: HEAT_2 Location: 1540275-1540500 bp Feature: domain Description: HEAT_2 Location: 1 540275-1 540500 bp Feature: domain Description: HEAT_2 Location: 1540641-1540794 bp Feature: domain Description: HEAT_2 Location: 1 540641 -1 540794 bp Feature: gene Location: 1540853-1542697 bp Feature: gene Location: 1543106-1544563 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1543664-1544306 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 543664-1 544306 bp Feature: gene Location: 1544573-1545478 bp Feature: domain Description: DAP2 Location: 1544705-1545275 bp Feature: domain Description: DAP2 Location: 1 544705-1 545275 bp Feature: gene Location: 1545477-1547171 bp Feature: domain Description: BetA Location: 1545651-1546158 bp Feature: domain Description: BetA Location: 1 545651 -1 5461 58 bp Feature: domain Description: BetA Location: 1546299-1546572 bp Feature: domain Description: BetA Location: 1 546299-1 546572 bp Feature: domain Description: BetA Location: 1546737-1547151 bp Feature: domain Description: BetA Location: 1 546737-1 5471 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), HEAT (sd00044), Aldo_ket_red (pfam00248), RVT-Retrons, rpt_mate_G_obs (TIGR02996), LRR_RI (smart00368), RCC1 (pfam00415), WD40 (smart00320), KOG0268 (KOG0268, Sof1-like rRNA processing protein (contains WD40 repeats) ), DAP2 (COG1506)
BetA (COG2303)

Seq: JABUMT010000002.1 Myxococcus sp. CA056 NODE_2_length_1734307_cov_25.9699, whole genome shotgun sequence (1734307 bp)
Overview 1 RT 1: 519059-525324 bp Neighborhood of RT #1 [519059, 525324] UPF0227 RVT-Retrons Feature: gene Location: 519059-519745 bp Feature: domain Description: UPF0227 Location: 519107-519686 bp Feature: domain Description: UPF02 2 7 Location: 519107-519686 bp Feature: gene Location: 519847-520197 bp Feature: gene Location: 520340-521617 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 520799-521411 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 0799-52 1411 bp Feature: gene Location: 521783-523426 bp Feature: gene Location: 523423-525324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0227 (pfam05728), RVT-Retrons

Seq: JABUMT010000006.1 Myxococcus sp. CA056 NODE_6_length_449664_cov_22.7855, whole genome shotgun sequence (449664 bp)
Overview 1 RT 1: 100471-104183 bp Neighborhood of RT #1 [100471, 104183] RVT-Retrons Feature: gene Location: 100471-101034 bp Feature: gene Location: 101027-101587 bp Feature: gene Location: 101746-103074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102190-102844 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102190-102844 bp Feature: gene Location: 103447-103770 bp Feature: gene Location: 103980-104183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons