myRT

myRT report for GCA_013336725.1_ASM1333672v1

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Seq: JABUMR010000002.1 Myxococcus sp. CA040A NODE_2_length_1413938_cov_21.7139, whole genome shotgun sequence (1413938 bp)
Overview 1 RT 1: 598837-602273 bp Neighborhood of RT #1 [598837, 602332] ZnMc FN3 FN3 RVT-GII Feature: gene Location: 598837-599253 bp Feature: gene Location: 599308-600585 bp Feature: domain Description: ZnMc Location: 599440-599962 bp Feature: domain Description: ZnMc Location: 599440-599962 bp Feature: domain Description: FN3 Location: 600076-600319 bp Feature: domain Description: FN3 Location: 600076-60031 9 bp Feature: domain Description: FN3 Location: 600334-600577 bp Feature: domain Description: FN3 Location: 600334-600577 bp Feature: gene Location: 601718-602332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602000-602273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602000-602273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZnMc (smart00235), FN3 (smart00060), RVT-GII

Seq: JABUMR010000003.1 Myxococcus sp. CA040A NODE_3_length_1260733_cov_24.6893, whole genome shotgun sequence (1260733 bp)
Overview 1 RT 1: 137568-143833 bp Neighborhood of RT #1 [137568, 143833] UPF0227 RVT-Retrons Feature: gene Location: 137568-138254 bp Feature: domain Description: UPF0227 Location: 137616-138195 bp Feature: domain Description: UPF02 2 7 Location: 137616-138195 bp Feature: gene Location: 138356-138706 bp Feature: gene Location: 138849-140126 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 139308-139920 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 139308-13992 0 bp Feature: gene Location: 140292-141935 bp Feature: gene Location: 141932-143833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0227 (pfam05728), RVT-Retrons

Seq: JABUMR010000004.1 Myxococcus sp. CA040A NODE_4_length_1255103_cov_22.1063, whole genome shotgun sequence (1255103 bp)
Overview 1 RT 1: 343048-346760 bp Neighborhood of RT #1 [343048, 346760] RVT-Retrons Feature: gene Location: 343048-343251 bp Feature: gene Location: 343461-343784 bp Feature: gene Location: 344157-345485 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 344601-345255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 44601-3 45255 bp Feature: gene Location: 345644-346204 bp Feature: gene Location: 346197-346760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JABUMR010000006.1 Myxococcus sp. CA040A NODE_6_length_960455_cov_25.9478, whole genome shotgun sequence (960455 bp)
Overview 1 RT 1: 654021-666846 bp Neighborhood of RT #1 [654021, 666866] WD40 WD40 WD40 KOG0268 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DAP2 BetA BetA BetA Feature: gene Location: 654021-660551 bp Feature: domain Description: WD40 Location: 654285-654381 bp Feature: domain Description: WD4 0 Location: 654 285-654 381 bp Feature: domain Description: WD40 Location: 654399-654501 bp Feature: domain Description: WD4 0 Location: 654 399-654 501 bp Feature: domain Description: WD40 Location: 654543-654630 bp Feature: domain Description: WD4 0 Location: 654 54 3-654 630 bp Feature: domain Description: KOG0268 Location: 654729-654972 bp Feature: domain Description: KOG0268 Location: 654 729-654 972 bp Feature: domain Description: HEAT_2 Location: 655047-655257 bp Feature: domain Description: HEAT_2 Location: 65504 7-655257 bp Feature: domain Description: HEAT_2 Location: 655854-656103 bp Feature: domain Description: HEAT_2 Location: 655854 -656103 bp Feature: domain Description: HEAT_2 Location: 656148-656301 bp Feature: domain Description: HEAT_2 Location: 65614 8-656301 bp Feature: domain Description: HEAT_2 Location: 656343-656547 bp Feature: domain Description: HEAT_2 Location: 65634 3-65654 7 bp Feature: domain Description: HEAT Location: 656607-656904 bp Feature: domain Description: HEAT Location: 656607-656904 bp Feature: domain Description: HEAT_2 Location: 656958-657165 bp Feature: domain Description: HEAT_2 Location: 656958-657165 bp Feature: domain Description: HEAT_2 Location: 657798-657984 bp Feature: domain Description: HEAT_2 Location: 657798-657984 bp Feature: domain Description: HEAT_2 Location: 658032-658227 bp Feature: domain Description: HEAT_2 Location: 658032-658227 bp Feature: domain Description: HEAT_2 Location: 658395-658635 bp Feature: domain Description: HEAT_2 Location: 658395-658635 bp Feature: domain Description: HEAT_2 Location: 659220-659463 bp Feature: domain Description: HEAT_2 Location: 659220-6594 63 bp Feature: domain Description: HEAT_2 Location: 659973-660195 bp Feature: domain Description: HEAT_2 Location: 659973-660195 bp Feature: domain Description: HEAT_2 Location: 660336-660489 bp Feature: domain Description: HEAT_2 Location: 660336-6604 89 bp Feature: gene Location: 660548-662392 bp Feature: gene Location: 662801-664258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 663359-664001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 663359-664 001 bp Feature: gene Location: 664268-665173 bp Feature: domain Description: DAP2 Location: 664400-664970 bp Feature: domain Description: DAP2 Location: 664 4 00-664 970 bp Feature: gene Location: 665172-666866 bp Feature: domain Description: BetA Location: 665346-665853 bp Feature: domain Description: BetA Location: 66534 6-665853 bp Feature: domain Description: BetA Location: 665994-666267 bp Feature: domain Description: BetA Location: 665994 -666267 bp Feature: domain Description: BetA Location: 666432-666846 bp Feature: domain Description: BetA Location: 6664 32-66684 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), KOG0268 (KOG0268, Sof1-like rRNA processing protein (contains WD40 repeats) ), HEAT_2 (pfam13646), HEAT (sd00044), RVT-Retrons, DAP2 (COG1506), BetA (COG2303)

Seq: JABUMR010000007.1 Myxococcus sp. CA040A NODE_7_length_760120_cov_24.3371, whole genome shotgun sequence (760120 bp)
Overview 1 RT 1: 352198-362123 bp Neighborhood of RT #1 [352198, 362131] HEAT_2 HEAT HEAT_2 HEAT_2 HEAT_2 Aldo_ket_red RVT-Retrons rpt_mate_G_obs LRR_RI RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 Feature: gene Location: 352198-352386 bp Feature: gene Location: 352141-355092 bp Feature: domain Description: HEAT_2 Location: 352198-352447 bp Feature: domain Description: HEAT_2 Location: 35 2198-35 2447 bp Feature: domain Description: HEAT Location: 352483-352543 bp Feature: domain Description: HEAT Location: 35 2483-35 25 43 bp Feature: domain Description: HEAT_2 Location: 353209-353386 bp Feature: domain Description: HEAT_2 Location: 35 3209-35 3386 bp Feature: domain Description: HEAT_2 Location: 353398-353608 bp Feature: domain Description: HEAT_2 Location: 35 3398-35 3608 bp Feature: domain Description: HEAT_2 Location: 353692-353872 bp Feature: domain Description: HEAT_2 Location: 35 3692-35 3872 bp Feature: domain Description: Aldo_ket_red Location: 354217-354949 bp Feature: domain Description: Aldo_ket_red Location: 35 4217-35 4949 bp Feature: gene Location: 355308-356726 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 355908-356499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35 5 908-35 6499 bp Feature: gene Location: 356723-357697 bp Feature: domain Description: rpt_mate_G_obs Location: 356735-356849 bp Feature: domain Description: rpt_mate_G_obs Location: 35 6735 -35 6849 bp Feature: domain Description: LRR_RI Location: 357152-357644 bp Feature: domain Description: LRR_RI Location: 35 715 2-35 7644 bp Feature: gene Location: 357767-362131 bp Feature: domain Description: RCC1 Location: 357977-358118 bp Feature: domain Description: RCC1 Location: 35 7977-35 8118 bp Feature: domain Description: RCC1 Location: 358136-358268 bp Feature: domain Description: RCC1 Location: 35 8136-35 8268 bp Feature: domain Description: RCC1 Location: 358277-358418 bp Feature: domain Description: RCC1 Location: 35 8277-35 8418 bp Feature: domain Description: RCC1 Location: 358427-358568 bp Feature: domain Description: RCC1 Location: 35 8427-35 85 68 bp Feature: domain Description: RCC1 Location: 358577-358694 bp Feature: domain Description: RCC1 Location: 35 85 77-35 8694 bp Feature: domain Description: RCC1 Location: 358727-358868 bp Feature: domain Description: RCC1 Location: 35 8727-35 8868 bp Feature: domain Description: RCC1 Location: 358877-359015 bp Feature: domain Description: RCC1 Location: 35 8877-35 9015 bp Feature: domain Description: RCC1 Location: 359027-359168 bp Feature: domain Description: RCC1 Location: 35 9027-35 9168 bp Feature: domain Description: RCC1 Location: 359177-359318 bp Feature: domain Description: RCC1 Location: 35 9177-35 9318 bp Feature: domain Description: RCC1 Location: 359327-359468 bp Feature: domain Description: RCC1 Location: 35 9327-35 9468 bp Feature: domain Description: RCC1 Location: 359477-359618 bp Feature: domain Description: RCC1 Location: 35 9477-35 9618 bp Feature: domain Description: RCC1 Location: 359627-359768 bp Feature: domain Description: RCC1 Location: 35 9627-35 9768 bp Feature: domain Description: RCC1 Location: 359777-359876 bp Feature: domain Description: RCC1 Location: 35 9777-35 9876 bp Feature: domain Description: RCC1 Location: 359927-360065 bp Feature: domain Description: RCC1 Location: 35 9927-360065 bp Feature: domain Description: RCC1 Location: 360077-360218 bp Feature: domain Description: RCC1 Location: 360077-360218 bp Feature: domain Description: RCC1 Location: 360227-360368 bp Feature: domain Description: RCC1 Location: 360227-360368 bp Feature: domain Description: RCC1 Location: 360377-360518 bp Feature: domain Description: RCC1 Location: 360377-3605 18 bp Feature: domain Description: RCC1 Location: 360527-360668 bp Feature: domain Description: RCC1 Location: 3605 27-360668 bp Feature: domain Description: RCC1 Location: 360677-360818 bp Feature: domain Description: RCC1 Location: 360677-360818 bp Feature: domain Description: RCC1 Location: 360827-360968 bp Feature: domain Description: RCC1 Location: 360827-360968 bp Feature: domain Description: RCC1 Location: 360992-361130 bp Feature: domain Description: RCC1 Location: 360992-361130 bp Feature: domain Description: RCC1 Location: 361142-361283 bp Feature: domain Description: RCC1 Location: 361142-361283 bp Feature: domain Description: RCC1 Location: 361292-361433 bp Feature: domain Description: RCC1 Location: 361292-361433 bp Feature: domain Description: RCC1 Location: 361442-361583 bp Feature: domain Description: RCC1 Location: 361442-3615 83 bp Feature: domain Description: RCC1 Location: 361592-361733 bp Feature: domain Description: RCC1 Location: 3615 92-361733 bp Feature: domain Description: RCC1 Location: 361742-361883 bp Feature: domain Description: RCC1 Location: 361742-361883 bp Feature: domain Description: RCC1 Location: 361892-362027 bp Feature: domain Description: RCC1 Location: 361892-362027 bp Feature: domain Description: RCC1 Location: 362036-362123 bp Feature: domain Description: RCC1 Location: 362036-362123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, rpt_mate_G_obs (TIGR02996), LRR_RI (smart00368), RCC1 (pfam00415)