myRT

myRT report for GCA_013336765.1_ASM1333676v1

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Seq: SUPU01000017.1 Serratia fonticola strain UMA3116 UMA3116_17, whole genome shotgun sequence (137489 bp)
Overview 1 RT 1: 23697-27582 bp Neighborhood of RT #1 [23697, 27587] PRK15287 FimA RVT-UG4 Rve Feature: gene Location: 23697-24215 bp Feature: domain Description: PRK15287 Location: 23748-24213 bp Feature: domain Description: PRK1 5287 Location: 23748-2421 3 bp Feature: gene Location: 24231-24764 bp Feature: domain Description: FimA Location: 24270-24762 bp Feature: domain Description: FimA Location: 24270-24762 bp Feature: gene Location: 24809-25666 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 25175-25613 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 251 75-2561 3 bp Feature: gene Location: 25789-26727 bp Feature: gene Location: 27177-27587 bp Feature: domain Description: Rve Location: 27192-27582 bp Feature: domain Description: Rve Location: 271 92-27582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4, Rve (COG3316)

Seq: SUPU01000058.1 Serratia fonticola strain UMA3116 UMA3116_58, whole genome shotgun sequence (1041 bp)
Overview 1 RT 1: 2-920 bp Neighborhood of RT #1 [2, 925] RVT-GII Feature: gene Location: 2-925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 3-92 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SUPU01000009.1 Serratia fonticola strain UMA3116 UMA3116_9, whole genome shotgun sequence (201389 bp)
Overview 1 RT 1: 185024-187651 bp Neighborhood of RT #1 [185024, 187651] PRK15287 PRK15260 RVT-UG4 Feature: gene Location: 185024-185524 bp Feature: domain Description: PRK15287 Location: 185048-185522 bp Feature: domain Description: PRK15287 Location: 185048-185522 bp Feature: gene Location: 185536-186084 bp Feature: domain Description: PRK15260 Location: 185566-186079 bp Feature: domain Description: PRK15260 Location: 185566-186079 bp Feature: gene Location: 186105-186485 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 186180-186483 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 186180-186483 bp Feature: gene Location: 186581-186790 bp Feature: gene Location: 186806-187651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), PRK15260 (fimbrial protein SteF; Provisional), RVT-UG4