myRT

myRT report for GCA_013337655.1_ASM1333765v1

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Seq: SWJW01000020.1 Lelliottia aquatilis strain UMG3140 UMG3140_20, whole genome shotgun sequence (93384 bp)
Overview 1 RT 1: 62018-70177 bp Neighborhood of RT #1 [62018, 70407] COG4453 DUF930 RVT-UG4 Invasin_D3 LysM IAT_beta Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Invasin_D3 Feature: gene Location: 62018-62284 bp Feature: domain Description: COG4453 Location: 62024-62279 bp Feature: domain Description: COG4453 Location: 62024-62279 bp Feature: gene Location: 62558-62989 bp Feature: domain Description: DUF930 Location: 62753-62969 bp Feature: domain Description: DUF930 Location: 62753-62969 bp Feature: gene Location: 63993-64763 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 64065-64503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 64065-64503 bp Feature: gene Location: 64791-66596 bp Feature: domain Description: Invasin_D3 Location: 65289-65538 bp Feature: domain Description: Invasin_D3 Location: 65289-65538 bp Feature: gene Location: 66691-70407 bp Feature: domain Description: LysM Location: 66898-67036 bp Feature: domain Description: LysM Location: 66898-67036 bp Feature: domain Description: IAT_beta Location: 67147-67978 bp Feature: domain Description: IAT_beta Location: 671 47-67978 bp Feature: domain Description: Invasin_D3 Location: 68302-68644 bp Feature: domain Description: Invasin_D3 Location: 68302-68644 bp Feature: domain Description: Invasin_D3 Location: 68677-68983 bp Feature: domain Description: Invasin_D3 Location: 68677-68983 bp Feature: domain Description: Invasin_D3 Location: 68986-69250 bp Feature: domain Description: Invasin_D3 Location: 68986-69250 bp Feature: domain Description: Invasin_D3 Location: 69319-69592 bp Feature: domain Description: Invasin_D3 Location: 6931 9-69592 bp Feature: domain Description: Invasin_D3 Location: 69613-69889 bp Feature: domain Description: Invasin_D3 Location: 6961 3-69889 bp Feature: domain Description: Invasin_D3 Location: 69901-70177 bp Feature: domain Description: Invasin_D3 Location: 69901 -701 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4453 (Uncharacterized conserved protein, DUF1778 family ), DUF930 (pfam06059), RVT-UG4, Invasin_D3 (pfam09134), LysM (smart00257), IAT_beta (pfam11924)

Seq: SWJW01000004.1 Lelliottia aquatilis strain UMG3140 UMG3140_4, whole genome shotgun sequence (295106 bp)
Overview 1 RT 1: 160814-169464 bp Neighborhood of RT #1 [160814, 169464] FimD RfaL Wzy_C_2 RVT-UG4 PRK10902 Feature: gene Location: 160814-163654 bp Feature: domain Description: FimD Location: 160919-163448 bp Feature: domain Description: FimD Location: 160919-163448 bp Feature: gene Location: 163651-165447 bp Feature: domain Description: RfaL Location: 163681-164731 bp Feature: domain Description: RfaL Location: 163681-164731 bp Feature: domain Description: Wzy_C_2 Location: 164782-165322 bp Feature: domain Description: Wzy_C_2 Location: 164782 -16532 2 bp Feature: gene Location: 165468-167846 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 165915-166359 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 165915-166359 bp Feature: gene Location: 168017-169186 bp Feature: domain Description: PRK10902 Location: 168485-169175 bp Feature: domain Description: PRK10902 Location: 168485-169175 bp Feature: gene Location: 169297-169464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), RfaL (COG3307), Wzy_C_2 (pfam11846), RVT-UG4, PRK10902 (FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional)