myRT

myRT report for GCA_013340105.1_ASM1334010v1

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Seq: JABUNM010000139.1 Escherichia coli strain SCPM-O-B-8738, whole genome shotgun sequence (2206 bp)
Overview 1 RT 1: 1-1869 bp Neighborhood of RT #1 [1, 2114] RVT-GII GIIM Feature: gene Location: 1-297 bp Feature: gene Location: 591-2114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1 596 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1869 bp Feature: domain Description: GIIM Note: maturase Location: 1 671 -1 869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABUNM010000030.1 Escherichia coli strain SCPM-O-B-8738, whole genome shotgun sequence (54322 bp)
Overview 1 RT 1: 2-2690 bp Neighborhood of RT #1 [2, 2698] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 2-337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128-206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 8-2 06 bp Feature: gene Location: 365-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-653 bp Feature: domain Description: GIIM Note: maturase Location: 701-881 bp Feature: domain Description: GIIM Note: maturase Location: 701-881 bp Feature: gene Location: 1208-1396 bp Feature: gene Location: 1436-2698 bp Feature: domain Description: YesM Location: 1949-2690 bp Feature: domain Description: YesM Location: 1949-2 690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JABUNM010000006.1 Escherichia coli strain SCPM-O-B-8738, whole genome shotgun sequence (165884 bp)
Overview 1 RT 1: 137374-143405 bp Neighborhood of RT #1 [137374, 143405] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137374-138294 bp Feature: domain Description: AbiEii Location: 137416-138157 bp Feature: domain Description: AbiEii Location: 13 7416-13 8157 bp Feature: gene Location: 138281-139084 bp Feature: domain Description: AbiEi_3_N Location: 138314-138575 bp Feature: domain Description: AbiEi_3 _N Location: 13 83 14-13 8575 bp Feature: domain Description: AbiEi_3 Location: 138587-139043 bp Feature: domain Description: AbiEi_3 Location: 13 8587-13 9043 bp Feature: gene Location: 139379-142588 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 139907-140396 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 9907-1403 96 bp Feature: domain Description: nitrilase Location: 141902-142499 bp Feature: domain Description: nitrilase Location: 141902-142499 bp Feature: gene Location: 142749-142889 bp Feature: domain Description: Phage_ASH Location: 142776-142869 bp Feature: domain Description: Phage_ASH Location: 142776-142869 bp Feature: gene Location: 142935-143405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JABUNM010000082.1 Escherichia coli strain SCPM-O-B-8738, whole genome shotgun sequence (11813 bp)
Overview 1 RT 1: 2-1791 bp Neighborhood of RT #1 [2, 1799] RVT-GII Asparaginase_2 Feature: gene Location: 2-244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104-206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 -206 bp Feature: gene Location: 292-441 bp Feature: gene Location: 768-1799 bp Feature: domain Description: Asparaginase_2 Location: 858-1791 bp Feature: domain Description: Asparaginase_2 Location: 858-1791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Asparaginase_2 (pfam01112)