myRT

myRT report for GCA_013342805.1_ASM1334280v1

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Seq: JABUWV010000125.1 Escherichia coli strain d29-1 NODE_125_length_3855_cov_21.700107, whole genome shotgun sequence (3855 bp)
Overview 1 RT 1: 699-3730 bp Neighborhood of RT #1 [699, 3762] Tox-WTIP RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 699-1121 bp Feature: domain Description: Tox-WTIP Location: 981-1119 bp Feature: domain Description: Tox-WTIP Location: 981 -1 1 1 9 bp Feature: gene Location: 1148-1492 bp Feature: gene Location: 1841-3340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294-2951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294-2951 bp Feature: domain Description: GIIM Note: maturase Location: 3035-3245 bp Feature: domain Description: GIIM Note: maturase Location: 3035-3245 bp Feature: gene Location: 3547-3762 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3568-3730 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 3568-3730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tox-WTIP (pfam15654), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)

Seq: JABUWV010000024.1 Escherichia coli strain d29-1 NODE_24_length_68631_cov_23.165742, whole genome shotgun sequence (68631 bp)
Overview 1 RT 1: 64625-68525 bp Neighborhood of RT #1 [64625, 68525] PRK09692 RVT-UG5 Feature: gene Location: 64625-64849 bp Feature: gene Location: 64994-66244 bp Feature: domain Description: PRK09692 Location: 65003-66203 bp Feature: domain Description: PRK09692 Location: 65003-662 03 bp Feature: gene Location: 66310-68283 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66787-67318 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66787-67318 bp Feature: gene Location: 68232-68525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5