myRT

myRT report for GCA_013344245.1_ASM1334424v1

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Seq: JABTZD010000013.1 Streptococcus suis strain SC1B9 10CY_R1_(paired)_contig_13, whole genome shotgun sequence (188144 bp)
Overview 1 RT 1: 110576-120833 bp Neighborhood of RT #1 [110576, 120833] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 110576-111085 bp Feature: gene Location: 111136-117036 bp Feature: domain Description: N6_Mtase Location: 113143-113749 bp Feature: domain Description: N6_Mtase Location: 1 1 31 43-1 1 3749 bp Feature: domain Description: COG4646 Location: 114325-116632 bp Feature: domain Description: COG4646 Location: 1 1 4325-1 1 6632 bp Feature: gene Location: 117601-119412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117865-118687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7865-1 1 8687 bp Feature: domain Description: Intron_maturas2 Location: 118756-119230 bp Feature: domain Description: Intron_maturas2 Location: 1 1 8756-1 1 9230 bp Feature: domain Description: HNHc Note: nucleases Location: 119230-119395 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 9230-1 1 9395 bp Feature: gene Location: 119445-120464 bp Feature: domain Description: KOG1000 Location: 119520-119715 bp Feature: domain Description: KOG1 000 Location: 1 1 9520-1 1 971 5 bp Feature: gene Location: 120534-120833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: JABTZD010000090.1 Streptococcus suis strain SC1B9 10CY_R1_(paired)_contig_90, whole genome shotgun sequence (1634 bp)
Overview 1 RT 1: 83-1136 bp Neighborhood of RT #1 [83, 1147] RVT-GII GIIM Feature: gene Location: 83-1147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 87-902 bp Feature: domain Description: GIIM Note: maturase Location: 959-1136 bp Feature: domain Description: GIIM Note: maturase Location: 959-1136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)