myRT

myRT report for GCA_013344365.1_ASM1334436v1

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Seq: JABTZK010000017.1 Streptococcus suis strain BJBY17-1 NODE_17_length_34874_cov_277.125, whole genome shotgun sequence (34874 bp)
Overview 1 RT 1: 1574-10883 bp Neighborhood of RT #1 [1574, 11287] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 1574-1873 bp Feature: gene Location: 1944-2963 bp Feature: domain Description: KOG1000 Location: 2019-2214 bp Feature: domain Description: KOG1 000 Location: 201 9-221 4 bp Feature: gene Location: 2996-4807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260-4082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260-4082 bp Feature: domain Description: Intron_maturas2 Location: 4151-4604 bp Feature: domain Description: Intron_maturas2 Location: 41 51 -4604 bp Feature: domain Description: HNHc Note: nucleases Location: 4622-4778 bp Feature: domain Description: HNHc Note: nucleases Location: 4622-4778 bp Feature: gene Location: 5047-5247 bp Feature: gene Location: 5372-11287 bp Feature: domain Description: N6_Mtase Location: 7397-7988 bp Feature: domain Description: N6_Mtase Location: 7397-7988 bp Feature: domain Description: COG4646 Location: 8579-10883 bp Feature: domain Description: COG4646 Location: 8579-1 0883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: JABTZK010000046.1 Streptococcus suis strain BJBY17-1 NODE_46_length_2259_cov_295.837, whole genome shotgun sequence (2259 bp)
Overview 1 RT 1: 1-1561 bp Neighborhood of RT #1 [1, 1563] RVT-GII ArsD Feature: gene Location: 1-627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205-628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 05-62 8 bp Feature: gene Location: 993-1172 bp Feature: gene Location: 1192-1563 bp Feature: domain Description: ArsD Location: 1195-1561 bp Feature: domain Description: ArsD Location: 1195-1561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArsD (pfam06953), RVT-GII

Seq: JABTZK010000071.1 Streptococcus suis strain BJBY17-1 NODE_71_length_775_cov_549.51, whole genome shotgun sequence (775 bp)
Overview 1 RT 1: 48-582 bp Neighborhood of RT #1 [48, 773] RVT-GII GIIM Feature: gene Location: 48-773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57-315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57-3 15 bp Feature: domain Description: GIIM Note: maturase Location: 369-582 bp Feature: domain Description: GIIM Note: maturase Location: 3 69-582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABTZK010000094.1 Streptococcus suis strain BJBY17-1 NODE_94_length_364_cov_315.171, whole genome shotgun sequence (364 bp)
Overview 1 RT 1: 143-362 bp Neighborhood of RT #1 [143, 361] RVT-GII Feature: gene Location: 143-361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146-362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 6-362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII