myRT

myRT report for GCA_013346845.1_ASM1334684v1

Download annotations/find similar RTs

Seq: JABVAQ010000002.1 Bacillus thuringiensis strain FDAARGOS_801 plasmid unnamed2, whole genome shotgun sequence (80699 bp)
Overview 1 RT 1: 18390-24608 bp Neighborhood of RT #1 [18390, 24697] Lysozyme_like Spr RVT-GII HNHc Lysozyme_like VirB4_CagE Feature: gene Location: 18390-18998 bp Feature: gene Location: 19022-19780 bp Feature: domain Description: Lysozyme_like Location: 19025-19361 bp Feature: domain Description: Lysozyme_like Location: 1 9025-1 9361 bp Feature: domain Description: Spr Location: 19376-19763 bp Feature: domain Description: Spr Location: 1 9376-1 9763 bp Feature: gene Location: 19896-21665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20154-20850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 54-20850 bp Feature: domain Description: HNHc Note: nucleases Location: 21411-21549 bp Feature: domain Description: HNHc Note: nucleases Location: 21 41 1 -21 549 bp Feature: gene Location: 22375-22761 bp Feature: domain Description: Lysozyme_like Location: 22594-22741 bp Feature: domain Description: Lysozyme_like Location: 22594-22741 bp Feature: gene Location: 22763-24697 bp Feature: domain Description: VirB4_CagE Location: 23093-24608 bp Feature: domain Description: VirB4_CagE Location: 23093-24608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), Spr (COG0791), RVT-GII, HNHc (smart00507), VirB4_CagE (TIGR00929)

Seq: JABVAQ010000004.1 Bacillus thuringiensis strain FDAARGOS_801 plasmid unnamed4, whole genome shotgun sequence (414001 bp)
Overview 1 RT 1: 68114-81329 bp 2 RT 2: 249827-259565 bp 3 RT 3: 274449-288497 bp 4 RT 4: 332881-347440 bp Neighborhood of RT #1 [68114, 81391] RapH_N TPR TPR PRK13922 AE_Prim_S_like RVT-UG10 DDE_Tnp_1 RVT-GII GIIM LbH_MAT_like Neighborhood of RT #2 [249827, 259738] Rve RVT-GII GIIM DDE_Tnp_1 metallo-hydrolase-like_MBL-fold RVT-GII GIIM DDE_Tnp_1 DUF1878 Neighborhood of RT #3 [274449, 288497] NlpD Spr RVT-GII Intron_maturas2 HNHc CwlT_like RVT-GII HNHc RVT-GII HNHc CwlT_like Neighborhood of RT #4 [332881, 347619] COG4584 RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII GIIM Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 68114-69205 bp Feature: domain Description: RapH_N Location: 68135-68306 bp Feature: domain Description: RapH_N Location: 68135-68306 bp Feature: domain Description: TPR Location: 68441-68708 bp Feature: domain Description: TPR Location: 68441-68708 bp Feature: domain Description: TPR Location: 68753-69164 bp Feature: domain Description: TPR Location: 68753-69164 bp Feature: gene Location: 69668-69895 bp Feature: domain Description: PRK13922 Location: 69755-69875 bp Feature: domain Description: PRK1392 2 Location: 69755-69875 bp Feature: gene Location: 70171-75810 bp Feature: domain Description: AE_Prim_S_like Location: 70381-70600 bp Feature: domain Description: AE_Prim_S_like Location: 70381-70600 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 71587-72241 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 71587-72 2 41 bp Feature: gene Location: 76249-76674 bp Feature: gene Location: 76684-77301 bp Feature: gene Location: 77279-78337 bp Feature: domain Description: DDE_Tnp_1 Location: 77636-78323 bp Feature: domain Description: DDE_Tnp_1 Location: 77636-7832 3 bp Feature: gene Location: 78818-80149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79127-79766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7912 7-79766 bp Feature: domain Description: GIIM Note: maturase Location: 79841-80066 bp Feature: domain Description: GIIM Note: maturase Location: 79841-80066 bp Feature: gene Location: 80374-80685 bp Feature: gene Location: 80771-81391 bp Feature: domain Description: LbH_MAT_like Location: 80933-81329 bp Feature: domain Description: LbH_MAT_like Location: 80933-8132 9 bp Feature: gene Location: 249827-250360 bp Feature: domain Description: Rve Location: 249830-250352 bp Feature: domain Description: Rve Location: 2 49830-2 50352 bp Feature: gene Location: 250716-251180 bp Feature: gene Location: 251514-252845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251823-252462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5182 3-2 52 462 bp Feature: domain Description: GIIM Note: maturase Location: 252537-252762 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 537-2 52 762 bp Feature: gene Location: 253326-254384 bp Feature: domain Description: DDE_Tnp_1 Location: 253686-254370 bp Feature: domain Description: DDE_Tnp_1 Location: 2 53686-2 54370 bp Feature: gene Location: 254523-255443 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 254577-255279 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 2 54577-2 552 79 bp Feature: gene Location: 255779-255973 bp Feature: gene Location: 256309-257640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256618-257257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 56618-2 572 57 bp Feature: domain Description: GIIM Note: maturase Location: 257332-257557 bp Feature: domain Description: GIIM Note: maturase Location: 2 57332 -2 57557 bp Feature: gene Location: 258121-259179 bp Feature: domain Description: DDE_Tnp_1 Location: 258481-259165 bp Feature: domain Description: DDE_Tnp_1 Location: 2 58481-2 59165 bp Feature: gene Location: 259328-259738 bp Feature: domain Description: DUF1878 Location: 259337-259565 bp Feature: domain Description: DUF1878 Location: 2 59337-2 59565 bp Feature: gene Location: 274449-275318 bp Feature: domain Description: NlpD Location: 274464-274890 bp Feature: domain Description: NlpD Location: 2 74464-2 74890 bp Feature: domain Description: Spr Location: 274923-275259 bp Feature: domain Description: Spr Location: 2 7492 3-2 752 59 bp Feature: gene Location: 275342-275476 bp Feature: gene Location: 275478-277301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275742-276576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 75742 -2 76576 bp Feature: domain Description: Intron_maturas2 Location: 276645-276984 bp Feature: domain Description: Intron_maturas2 Location: 2 76645-2 76984 bp Feature: domain Description: HNHc Note: nucleases Location: 277122-277278 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7712 2 -2 772 78 bp Feature: gene Location: 277877-278068 bp Feature: domain Description: CwlT_like Location: 277904-278057 bp Feature: domain Description: CwlT_like Location: 2 77904-2 78057 bp Feature: gene Location: 278137-279933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278395-279100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 78395-2 79100 bp Feature: domain Description: HNHc Note: nucleases Location: 279661-279796 bp Feature: domain Description: HNHc Note: nucleases Location: 2 79661-2 79796 bp Feature: gene Location: 280245-280463 bp Feature: gene Location: 280989-282758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281247-281943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 812 47-2 81943 bp Feature: domain Description: HNHc Note: nucleases Location: 282504-282642 bp Feature: domain Description: HNHc Note: nucleases Location: 2 82 504-2 82 642 bp Feature: gene Location: 283468-284466 bp Feature: domain Description: CwlT_like Location: 284320-284440 bp Feature: domain Description: CwlT_like Location: 2 8432 0-2 84440 bp Feature: gene Location: 284463-288497 bp Feature: gene Location: 332881-334092 bp Feature: gene Location: 334815-336158 bp Feature: domain Description: COG4584 Location: 335277-335667 bp Feature: domain Description: COG4584 Location: 3352 77-335667 bp Feature: gene Location: 336815-338638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337085-337913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337085-337913 bp Feature: domain Description: Intron_maturas2 Location: 337985-338303 bp Feature: domain Description: Intron_maturas2 Location: 337985-338303 bp Feature: domain Description: HNHc Note: nucleases Location: 338456-338609 bp Feature: domain Description: HNHc Note: nucleases Location: 338456-338609 bp Feature: gene Location: 338777-338923 bp Feature: gene Location: 339605-341395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 339902-340598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 339902 -340598 bp Feature: domain Description: HNHc Note: nucleases Location: 341138-341270 bp Feature: domain Description: HNHc Note: nucleases Location: 341138-3412 70 bp Feature: gene Location: 341461-341898 bp Feature: gene Location: 342570-344444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342870-343575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342 870-343575 bp Feature: domain Description: GIIM Note: maturase Location: 343689-343857 bp Feature: domain Description: GIIM Note: maturase Location: 343689-343857 bp Feature: gene Location: 344818-346377 bp Feature: domain Description: Ftsk_gamma Location: 345367-345547 bp Feature: domain Description: Ftsk_gamma Location: 345367-345547 bp Feature: domain Description: Ftsk_gamma Location: 345700-345874 bp Feature: domain Description: Ftsk_gamma Location: 345700-345874 bp Feature: gene Location: 346636-347619 bp Feature: domain Description: rpsA Location: 346903-347440 bp Feature: domain Description: rpsA Location: 346903-347440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RapH_N (pfam18801), TPR (smart00028), PRK13922 (rod shape-determining protein MreC; Provisional), AE_Prim_S_like (cl01287), RVT-UG10, DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), LbH_MAT_like (cd04647), Rve (COG3316)
metallo-hydrolase-like_MBL-fold (cl23716), DUF1878 (pfam08963), NlpD (COG0739), Spr (COG0791), Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, COG4584 (Transposase ), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: JABVAQ010000005.1 Bacillus thuringiensis strain FDAARGOS_801 plasmid unnamed5, whole genome shotgun sequence (69355 bp)
Overview 1 RT 1: 21602-26839 bp Neighborhood of RT #1 [21602, 26907] DDE_Tnp_1 RVT-GII GIIM DEDD_Tnp_IS110 COG3547 Feature: gene Location: 21602-22654 bp Feature: domain Description: DDE_Tnp_1 Location: 21956-22640 bp Feature: domain Description: DDE_Tnp_1 Location: 21956-22640 bp Feature: gene Location: 22806-22985 bp Feature: gene Location: 23135-24466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23444-24083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 444-24083 bp Feature: domain Description: GIIM Note: maturase Location: 24158-24383 bp Feature: domain Description: GIIM Note: maturase Location: 24158-243 83 bp Feature: gene Location: 24760-24993 bp Feature: gene Location: 25678-26907 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 25693-26173 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 25693 -26173 bp Feature: domain Description: COG3547 Location: 26410-26839 bp Feature: domain Description: COG3 547 Location: 26410-2683 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), COG3547 (Transposase )

Seq: JABVAQ010000006.1 Bacillus thuringiensis strain FDAARGOS_801 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence (5651649 bp)
Overview 1 RT 1: 125682-129572 bp 2 RT 2: 376551-381215 bp 3 RT 3: 500407-504208 bp 4 RT 4: 773131-777077 bp 5 RT 5: 814485-819897 bp 6 RT 6: 1948940-1957032 bp 7 RT 7: 2151910-2158258 bp 8 RT 8: 2331511-2335892 bp 9 RT 9: 2661984-2665619 bp 10 RT 10: 2675021-2681230 bp 11 RT 11: 2867448-2871692 bp 12 RT 12: 3321061-3325817 bp 13 RT 13: 3789960-3793635 bp 14 RT 14: 3855150-3859509 bp 15 RT 15: 4872949-4876329 bp 16 RT 16: 5262062-5266072 bp Neighborhood of RT #1 [125682, 129586] DppB RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #2 [376551, 381226] DDE_Tnp_1 RVT-GII GIIM SrmB RRM_BsYxiN_like Neighborhood of RT #3 [500407, 504246] DDE_Tnp_1 RVT-GII GIIM UvdE Neighborhood of RT #4 [773131, 777077] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #5 [814485, 819899] NupC RVT-GII HNHc NupC NupC Neighborhood of RT #6 [1948940, 1957055] rnc SMC_prok_B RVT-GII HNHc SMC_prok_B PRK10416 Neighborhood of RT #7 [2151910, 2158323] CdnL FadH RVT-GII HNHc OYE_like_FMN GltS_FMN Neighborhood of RT #8 [2331511, 2336035] DDE_Tnp_1 RVT-GII GIIM COG4584 Neighborhood of RT #9 [2661984, 2665619] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #10 [2675021, 2681394] OmpR RVT-GII HNHc HATPase_BceS-YxdK-YvcQ-like Uup Uup Neighborhood of RT #11 [2867448, 2871692] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #12 [3321061, 3325828] RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Neighborhood of RT #13 [3789960, 3793649] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #14 [3855150, 3859523] CC3_like_SDR_a RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #15 [4872949, 4876343] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #16 [5262062, 5266086] VOC_Bs_YwkD_like RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 125682-126017 bp Feature: domain Description: DppB Location: 125685-126012 bp Feature: domain Description: DppB Location: 125685-126012 bp Feature: gene Location: 126180-126491 bp Feature: gene Location: 126716-128047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127025-127664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127025-127664 bp Feature: domain Description: GIIM Note: maturase Location: 127739-127964 bp Feature: domain Description: GIIM Note: maturase Location: 127739-127964 bp Feature: gene Location: 128197-128376 bp Feature: gene Location: 128528-129586 bp Feature: domain Description: DDE_Tnp_1 Location: 128885-129572 bp Feature: domain Description: DDE_Tnp_1 Location: 128885-129572 bp Feature: gene Location: 376551-377609 bp Feature: domain Description: DDE_Tnp_1 Location: 376908-377595 bp Feature: domain Description: DDE_Tnp_1 Location: 376908-377595 bp Feature: gene Location: 377761-377940 bp Feature: gene Location: 378090-379421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378399-379038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378399-379038 bp Feature: domain Description: GIIM Note: maturase Location: 379113-379338 bp Feature: domain Description: GIIM Note: maturase Location: 379113-379338 bp Feature: gene Location: 379646-379957 bp Feature: gene Location: 380180-381226 bp Feature: domain Description: SrmB Location: 380183-380993 bp Feature: domain Description: SrmB Location: 380183-380993 bp Feature: domain Description: RRM_BsYxiN_like Location: 381002-381215 bp Feature: domain Description: RRM_BsYxiN_like Location: 381002-381215 bp Feature: gene Location: 500407-501477 bp Feature: domain Description: DDE_Tnp_1 Location: 500776-501463 bp Feature: domain Description: DDE_Tnp_1 Location: 500776-5014 63 bp Feature: gene Location: 501629-501808 bp Feature: gene Location: 501958-503289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502267-502906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502267-502906 bp Feature: domain Description: GIIM Note: maturase Location: 502981-503206 bp Feature: domain Description: GIIM Note: maturase Location: 502981-503206 bp Feature: gene Location: 503514-503825 bp Feature: gene Location: 503908-504246 bp Feature: domain Description: UvdE Location: 503947-504208 bp Feature: domain Description: UvdE Location: 50394 7-504 208 bp Feature: gene Location: 773131-774201 bp Feature: domain Description: DDE_Tnp_1 Location: 773500-774187 bp Feature: domain Description: DDE_Tnp_1 Location: 773500-774 187 bp Feature: gene Location: 774353-774532 bp Feature: gene Location: 774682-776013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774991-775630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774 991-775630 bp Feature: domain Description: GIIM Note: maturase Location: 775705-775930 bp Feature: domain Description: GIIM Note: maturase Location: 775705-775930 bp Feature: gene Location: 776238-776549 bp Feature: gene Location: 776757-777077 bp Feature: gene Location: 814485-815390 bp Feature: domain Description: NupC Location: 814488-815379 bp Feature: domain Description: NupC Location: 814 4 88-815379 bp Feature: gene Location: 815727-815945 bp Feature: gene Location: 816119-817915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816413-817109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8164 13-817109 bp Feature: domain Description: HNHc Note: nucleases Location: 817709-817784 bp Feature: domain Description: HNHc Note: nucleases Location: 817709-817784 bp Feature: gene Location: 818102-818368 bp Feature: domain Description: NupC Location: 818105-818366 bp Feature: domain Description: NupC Location: 818105-818366 bp Feature: gene Location: 818718-819899 bp Feature: domain Description: NupC Location: 818721-819897 bp Feature: domain Description: NupC Location: 818721-819897 bp Feature: gene Location: 1948940-1949728 bp Feature: domain Description: rnc Location: 1949042-1949720 bp Feature: domain Description: rnc Location: 194 904 2-194 9720 bp Feature: gene Location: 1949875-1950366 bp Feature: domain Description: SMC_prok_B Location: 1949881-1950349 bp Feature: domain Description: SMC_prok_B Location: 194 9881-195034 9 bp Feature: gene Location: 1951076-1952845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1951334-1952030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1951334 -1952030 bp Feature: domain Description: HNHc Note: nucleases Location: 1952591-1952729 bp Feature: domain Description: HNHc Note: nucleases Location: 1952591-1952729 bp Feature: gene Location: 1953189-1956050 bp Feature: domain Description: SMC_prok_B Location: 1953195-1956018 bp Feature: domain Description: SMC_prok_B Location: 1953195-1956018 bp Feature: gene Location: 1956066-1957055 bp Feature: domain Description: PRK10416 Location: 1956090-1957032 bp Feature: domain Description: PRK104 16 Location: 1956090-1957032 bp Feature: gene Location: 2151910-2152386 bp Feature: domain Description: CdnL Location: 2151928-2152381 bp Feature: domain Description: CdnL Location: 2151928-2152381 bp Feature: gene Location: 2152948-2153202 bp Feature: domain Description: FadH Location: 2153035-2153167 bp Feature: domain Description: FadH Location: 2153035-2153167 bp Feature: gene Location: 2153901-2155670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2154159-2154855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2154 159-2154 855 bp Feature: domain Description: HNHc Note: nucleases Location: 2155416-2155554 bp Feature: domain Description: HNHc Note: nucleases Location: 21554 16-2155554 bp Feature: gene Location: 2155722-2156681 bp Feature: domain Description: OYE_like_FMN Location: 2155773-2156652 bp Feature: domain Description: OYE_like_FMN Location: 2155773-2156652 bp Feature: gene Location: 2156749-2158323 bp Feature: domain Description: GltS_FMN Location: 2156896-2158258 bp Feature: domain Description: GltS_FMN Location: 2156896-2158258 bp Feature: gene Location: 2331511-2332581 bp Feature: domain Description: DDE_Tnp_1 Location: 2331880-2332567 bp Feature: domain Description: DDE_Tnp_1 Location: 2331880-2332567 bp Feature: gene Location: 2332733-2332912 bp Feature: gene Location: 2333062-2334393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2333371-2334010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2333371-2334 010 bp Feature: domain Description: GIIM Note: maturase Location: 2334085-2334310 bp Feature: domain Description: GIIM Note: maturase Location: 2334 085-2334 310 bp Feature: gene Location: 2334618-2334929 bp Feature: gene Location: 2335040-2336035 bp Feature: domain Description: COG4584 Location: 2335502-2335892 bp Feature: domain Description: COG4 584 Location: 2335502-2335892 bp Feature: gene Location: 2661984-2663054 bp Feature: domain Description: DDE_Tnp_1 Location: 2662353-2663040 bp Feature: domain Description: DDE_Tnp_1 Location: 2662353-266304 0 bp Feature: gene Location: 2663206-2663385 bp Feature: gene Location: 2663535-2664866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2663844-2664483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266384 4 -2664 4 83 bp Feature: domain Description: GIIM Note: maturase Location: 2664558-2664783 bp Feature: domain Description: GIIM Note: maturase Location: 2664 558-2664 783 bp Feature: gene Location: 2665091-2665402 bp Feature: gene Location: 2665410-2665619 bp Feature: gene Location: 2675021-2675728 bp Feature: domain Description: OmpR Location: 2675030-2675699 bp Feature: domain Description: OmpR Location: 2675030-2675699 bp Feature: gene Location: 2675725-2675976 bp Feature: gene Location: 2676686-2678455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2676944-2677640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267694 4 -267764 0 bp Feature: domain Description: HNHc Note: nucleases Location: 2678201-2678339 bp Feature: domain Description: HNHc Note: nucleases Location: 2678201-2678339 bp Feature: gene Location: 2678649-2679314 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 2678979-2679303 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 2678979-2679303 bp Feature: gene Location: 2679748-2681394 bp Feature: domain Description: Uup Location: 2679775-2680006 bp Feature: domain Description: Uup Location: 2679775-2680006 bp Feature: domain Description: Uup Location: 2680021-2681230 bp Feature: domain Description: Uup Location: 2680021-2681230 bp Feature: gene Location: 2867448-2868518 bp Feature: domain Description: DDE_Tnp_1 Location: 2867817-2868504 bp Feature: domain Description: DDE_Tnp_1 Location: 2867817-2868504 bp Feature: gene Location: 2868670-2868849 bp Feature: gene Location: 2868999-2870330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869308-2869947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2869308-286994 7 bp Feature: domain Description: GIIM Note: maturase Location: 2870022-2870247 bp Feature: domain Description: GIIM Note: maturase Location: 2870022-287024 7 bp Feature: gene Location: 2870555-2870866 bp Feature: gene Location: 2870949-2871692 bp Feature: gene Location: 3321061-3321567 bp Feature: domain Description: RimL Location: 3321070-3321565 bp Feature: domain Description: RimL Location: 3321070-3321565 bp Feature: gene Location: 3321931-3322062 bp Feature: gene Location: 3322064-3323887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3322328-3323162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3322328-3323162 bp Feature: domain Description: Intron_maturas2 Location: 3323231-3323570 bp Feature: domain Description: Intron_maturas2 Location: 3323231-3323570 bp Feature: domain Description: HNHc Note: nucleases Location: 3323708-3323864 bp Feature: domain Description: HNHc Note: nucleases Location: 3323708-3323864 bp Feature: gene Location: 3324463-3325044 bp Feature: domain Description: Lysozyme_like Location: 3324598-3325033 bp Feature: domain Description: Lysozyme_like Location: 3324 598-3325033 bp Feature: gene Location: 3325460-3325828 bp Feature: domain Description: YxeA Location: 3325511-3325817 bp Feature: domain Description: YxeA Location: 3325511-3325817 bp Feature: gene Location: 3789960-3790223 bp Feature: gene Location: 3790231-3790542 bp Feature: gene Location: 3790767-3792098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3791076-3791715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3791076-3791715 bp Feature: domain Description: GIIM Note: maturase Location: 3791790-3792015 bp Feature: domain Description: GIIM Note: maturase Location: 3791790-3792015 bp Feature: gene Location: 3792248-3792427 bp Feature: gene Location: 3792579-3793649 bp Feature: domain Description: DDE_Tnp_1 Location: 3792948-3793635 bp Feature: domain Description: DDE_Tnp_1 Location: 379294 8-3793635 bp Feature: gene Location: 3855150-3855809 bp Feature: domain Description: CC3_like_SDR_a Location: 3855165-3855795 bp Feature: domain Description: CC3_like_SDR_a Location: 3855165-3855795 bp Feature: gene Location: 3856105-3856416 bp Feature: gene Location: 3856641-3857972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3856950-3857589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3856950-3857589 bp Feature: domain Description: GIIM Note: maturase Location: 3857664-3857889 bp Feature: domain Description: GIIM Note: maturase Location: 3857664 -3857889 bp Feature: gene Location: 3858122-3858301 bp Feature: gene Location: 3858453-3859523 bp Feature: domain Description: DDE_Tnp_1 Location: 3858822-3859509 bp Feature: domain Description: DDE_Tnp_1 Location: 3858822-3859509 bp Feature: gene Location: 4872949-4873341 bp Feature: gene Location: 4873642-4873899 bp Feature: gene Location: 4874175-4875506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4874484-4875123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 874 4 84 -4 875123 bp Feature: domain Description: GIIM Note: maturase Location: 4875198-4875423 bp Feature: domain Description: GIIM Note: maturase Location: 4 875198-4 8754 23 bp Feature: gene Location: 4875656-4875835 bp Feature: gene Location: 4875987-4876343 bp Feature: domain Description: DDE_Tnp_1 Location: 4876143-4876329 bp Feature: domain Description: DDE_Tnp_1 Location: 4 87614 3-4 876329 bp Feature: gene Location: 5262062-5262448 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 5262077-5262443 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 5262077-52624 4 3 bp Feature: gene Location: 5262668-5262979 bp Feature: gene Location: 5263204-5264535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263513-5264152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263513-5264 152 bp Feature: domain Description: GIIM Note: maturase Location: 5264227-5264452 bp Feature: domain Description: GIIM Note: maturase Location: 5264 227-5264 4 52 bp Feature: gene Location: 5264685-5264864 bp Feature: gene Location: 5265016-5266086 bp Feature: domain Description: DDE_Tnp_1 Location: 5265385-5266072 bp Feature: domain Description: DDE_Tnp_1 Location: 5265385-5266072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppB (COG0601), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), SrmB (COG0513), RRM_BsYxiN_like (cd12500), UvdE (pfam03851), NupC (COG1972), HNHc (smart00507), rnc (PRK00102)
SMC_prok_B (TIGR02168), PRK10416 (signal recognition particle-docking protein FtsY; Provisional), CdnL (COG1329), FadH (COG1902), OYE_like_FMN (cd02933), GltS_FMN (cd02808), COG4584 (Transposase ), OmpR (COG0745), HATPase_BceS-YxdK-YvcQ-like (cd16948), Uup (COG0488)
RimL (COG1670), Intron_maturas2 (pfam01348), Lysozyme_like (pfam13702), YxeA (COG5294), CC3_like_SDR_a (cd05250), VOC_Bs_YwkD_like (cd08352)