myRT

myRT report for GCA_013349825.1_ASM1334982v1

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Seq: DUYW01000026.1 TPA_asm: Gammaproteobacteria bacterium isolate MAG_00172_gam_018 SI34jun09_200mDRAFT_c1000269, whole genome shotgun sequence (26364 bp)
Overview 1 RT 1: 20723-26263 bp Neighborhood of RT #1 [20723, 26361] DUF1566 RVT-DGRs Avd_like Feature: gene Location: 20723-21343 bp Feature: gene Location: 21337-24099 bp Feature: domain Description: DUF1566 Location: 21463-21832 bp Feature: domain Description: DUF1 566 Location: 21 463-21 832 bp Feature: gene Location: 24096-25736 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24348-25071 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24348-25071 bp Feature: gene Location: 25867-26361 bp Feature: domain Description: Avd_like Location: 25951-26263 bp Feature: domain Description: Avd_like Location: 25951 -26263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)

Seq: DUYW01000179.1 TPA_asm: Gammaproteobacteria bacterium isolate MAG_00172_gam_018 SI34jun09_200mDRAFT_c1003902, whole genome shotgun sequence (4986 bp)
Overview 1 RT 1: 64-4634 bp Neighborhood of RT #1 [64, 4645] DUF1566 RVT-DGRs Avd_like PT DUF1566 Feature: gene Location: 64-255 bp Feature: gene Location: 283-807 bp Feature: domain Description: DUF1566 Location: 418-796 bp Feature: domain Description: DUF1566 Location: 418-796 bp Feature: gene Location: 831-2366 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1071-1803 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1071-1803 bp Feature: gene Location: 2581-2973 bp Feature: domain Description: Avd_like Location: 2608-2920 bp Feature: domain Description: Avd_like Location: 2 608-2 92 0 bp Feature: gene Location: 2996-4645 bp Feature: domain Description: PT Location: 3002-3041 bp Feature: domain Description: PT Location: 3002 -3041 bp Feature: domain Description: DUF1566 Location: 4172-4634 bp Feature: domain Description: DUF1566 Location: 4172 -4634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), PT (pfam04886)

Seq: DUYW01000248.1 TPA_asm: Gammaproteobacteria bacterium isolate MAG_00172_gam_018 SI34jun09_200mDRAFT_c1007489, whole genome shotgun sequence (3307 bp)
Overview 1 RT 1: 115-3306 bp Neighborhood of RT #1 [115, 3306] RVT-UG5 Feature: gene Location: 115-3177 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 604-1093 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 604-1093 bp Feature: gene Location: 3181-3306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5

Seq: DUYW01000253.1 TPA_asm: Gammaproteobacteria bacterium isolate MAG_00172_gam_018 SI34jun09_200mDRAFT_c1009200, whole genome shotgun sequence (2859 bp)
Overview 1 RT 1: 2-2525 bp Neighborhood of RT #1 [2, 2608] FlaA1 RVT-GII GIIM Feature: gene Location: 2-769 bp Feature: domain Description: FlaA1 Location: 8-737 bp Feature: domain Description: FlaA1 Location: 8-737 bp Feature: gene Location: 1268-2608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1571-2225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1571-2225 bp Feature: domain Description: GIIM Note: maturase Location: 2297-2525 bp Feature: domain Description: GIIM Note: maturase Location: 2297-2525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlaA1 (COG1086), RVT-GII, GIIM (pfam08388)

Seq: DUYW01000209.1 TPA_asm: Gammaproteobacteria bacterium isolate MAG_00172_gam_018 SI34jun09_200mDRAFT_c1009781, whole genome shotgun sequence (2737 bp)
Overview 1 RT 1: 2-2558 bp Neighborhood of RT #1 [2, 2734] FlaA1 RVT-GII GIIM Tra5 Feature: gene Location: 2-268 bp Feature: domain Description: FlaA1 Location: 8-239 bp Feature: domain Description: FlaA1 Location: 8-239 bp Feature: gene Location: 781-2094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1693 bp Feature: domain Description: GIIM Note: maturase Location: 1771-1999 bp Feature: domain Description: GIIM Note: maturase Location: 1771-1999 bp Feature: gene Location: 2168-2734 bp Feature: domain Description: Tra5 Location: 2171-2558 bp Feature: domain Description: Tra5 Location: 2171-25 5 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlaA1 (COG1086), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)