myRT

myRT report for GCA_013349845.1_ASM1334984v1

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Seq: DUYV01000151.1 TPA_asm: Gammaproteobacteria bacterium isolate MAG_00160_gam_009 SI48aug10_135mDRAFT_c1004492, whole genome shotgun sequence (3348 bp)
Overview 1 RT 1: 3-3335 bp Neighborhood of RT #1 [3, 3346] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 3-1229 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 243-975 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 243-975 bp Feature: gene Location: 1444-1836 bp Feature: domain Description: Avd_like Location: 1471-1783 bp Feature: domain Description: Avd_like Location: 1 471 -1 783 bp Feature: gene Location: 1859-3346 bp Feature: domain Description: DUF1566 Location: 2873-3335 bp Feature: domain Description: DUF1 566 Location: 2873-3335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), DUF1566 (pfam07603), RVT-DGRs

Seq: DUYV01000139.1 TPA_asm: Gammaproteobacteria bacterium isolate MAG_00160_gam_009 SI48aug10_135mDRAFT_c1004994, whole genome shotgun sequence (3111 bp)
Overview 1 RT 1: 2-3110 bp Neighborhood of RT #1 [2, 3109] FlaA1 RVT-GII GIIM PDDEXK_2 Feature: gene Location: 2-769 bp Feature: domain Description: FlaA1 Location: 8-737 bp Feature: domain Description: FlaA1 Location: 8-737 bp Feature: gene Location: 1268-2608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1571-2228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1571-2 2 2 8 bp Feature: domain Description: GIIM Note: maturase Location: 2297-2525 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 97-2 52 5 bp Feature: gene Location: 2831-3109 bp Feature: domain Description: PDDEXK_2 Location: 2849-3110 bp Feature: domain Description: PDDEXK_2 Location: 2 849-3110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FlaA1 (COG1086)

Seq: DUYV01000170.1 TPA_asm: Gammaproteobacteria bacterium isolate MAG_00160_gam_009 SI48aug10_135mDRAFT_c1005044, whole genome shotgun sequence (3086 bp)
Overview 1 RT 1: 100-2800 bp Neighborhood of RT #1 [100, 3084] Avd_like RVT-DGRs DUF1566 Feature: gene Location: 100-537 bp Feature: domain Description: Avd_like Location: 127-439 bp Feature: domain Description: Avd_like Location: 127-43 9 bp Feature: gene Location: 653-2308 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 920-1643 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 920-1643 bp Feature: gene Location: 2305-3084 bp Feature: domain Description: DUF1566 Location: 2431-2800 bp Feature: domain Description: DUF1566 Location: 243 1-2800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), DUF1566 (pfam07603), RVT-DGRs