myRT

myRT report for GCA_013357945.1_Pr1685

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Seq: JABVZQ010000001.1 Prosthecochloris sp. DSM 1685 assembly_contig_1, whole genome shotgun sequence (353618 bp)
Overview 1 RT 1: 193374-200597 bp Neighborhood of RT #1 [193374, 200617] Cas10_III LapA_dom RVT-CRISPR Cas1_I-II-III Csx15_I-U Feature: gene Location: 193374-195680 bp Feature: domain Description: Cas10_III Location: 193797-195207 bp Feature: domain Description: Cas1 0_III Location: 1 93797-1 95207 bp Feature: gene Location: 195909-196364 bp Feature: domain Description: LapA_dom Location: 195996-196098 bp Feature: domain Description: LapA_dom Location: 1 95996-1 96098 bp Feature: gene Location: 196400-198592 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 196610-197216 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 9661 0-1 9721 6 bp Feature: domain Description: Cas1_I-II-III Location: 197567-198554 bp Feature: domain Description: Cas1 _I-II-III Location: 1 97567-1 98554 bp Feature: gene Location: 199565-199852 bp Feature: gene Location: 200027-200617 bp Feature: domain Description: Csx15_I-U Location: 200303-200597 bp Feature: domain Description: Csx1 5_I-U Location: 200303-200597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas10_III (cl21742), LapA_dom (pfam06305), RVT-CRISPR, Cas1_I-II-III (cl00656), Csx15_I-U (cd09766)

Seq: JABVZQ010000016.1 Prosthecochloris sp. DSM 1685 assembly_contig_16, whole genome shotgun sequence (41189 bp)
Overview 1 RT 1: 39077-40938 bp Neighborhood of RT #1 [39077, 40943] RVT_N RVT-GII GIIM Feature: gene Location: 39077-39583 bp Feature: gene Location: 39699-39989 bp Feature: domain Description: RVT_N Location: 39744-39987 bp Feature: domain Description: RVT_N Location: 39744-39987 bp Feature: gene Location: 40089-40943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40092-40668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40092 -40668 bp Feature: domain Description: GIIM Note: maturase Location: 40719-40938 bp Feature: domain Description: GIIM Note: maturase Location: 40719-40938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)