myRT

myRT report for GCA_013358955.1_ASM1335895v1

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Seq: WNTO01000011.1 Escherichia coli strain MEX-19 scaffold11_size164453, whole genome shotgun sequence (164453 bp)
Overview 1 RT 1: 135816-141847 bp Neighborhood of RT #1 [135816, 141847] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 135816-136736 bp Feature: domain Description: AbiEii Location: 135858-136599 bp Feature: domain Description: AbiEii Location: 1 35858-1 36599 bp Feature: gene Location: 136723-137526 bp Feature: domain Description: AbiEi_3_N Location: 136756-137017 bp Feature: domain Description: AbiEi_3_N Location: 1 36756-1 3701 7 bp Feature: domain Description: AbiEi_3 Location: 137029-137485 bp Feature: domain Description: AbiEi_3 Location: 1 37029-1 37485 bp Feature: gene Location: 137821-141030 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 138349-138838 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 38349-1 38838 bp Feature: domain Description: nitrilase Location: 140344-140941 bp Feature: domain Description: nitrilase Location: 1 40344-1 40941 bp Feature: gene Location: 141191-141331 bp Feature: domain Description: Phage_ASH Location: 141218-141311 bp Feature: domain Description: Phage_ASH Location: 1 41 21 8-1 41 31 1 bp Feature: gene Location: 141377-141847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: WNTO01000077.1 Escherichia coli strain MEX-19 scaffold78_size2828, whole genome shotgun sequence (2828 bp)
Overview 1 RT 1: 93-2568 bp Neighborhood of RT #1 [93, 2633] RVT-GII GIIM PHA02517 Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1570-1995 bp Feature: gene Location: 2208-2633 bp Feature: domain Description: PHA02517 Location: 2232-2568 bp Feature: domain Description: PHA02 517 Location: 2 2 32 -2 568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)