myRT

myRT report for GCA_013359025.1_ASM1335902v1

Download annotations/find similar RTs

Seq: WNTS01000037.1 Escherichia coli strain MEX-15 scaffold37_size56424, whole genome shotgun sequence (56424 bp)
Overview 1 RT 1: 11477-14827 bp Neighborhood of RT #1 [11477, 14859] PinE RVT-GII GIIM PRK09413 Feature: gene Location: 11477-12124 bp Feature: domain Description: PinE Location: 11570-12119 bp Feature: domain Description: PinE Location: 1 1 570-1 21 1 9 bp Feature: gene Location: 12224-12625 bp Feature: gene Location: 12834-14186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13155-13773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 55-1 3773 bp Feature: domain Description: GIIM Note: maturase Location: 13821-14052 bp Feature: domain Description: GIIM Note: maturase Location: 1 3821 -1 4052 bp Feature: gene Location: 14257-14607 bp Feature: gene Location: 14662-14859 bp Feature: domain Description: PRK09413 Location: 14665-14827 bp Feature: domain Description: PRK0941 3 Location: 1 4665-1 4827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: WNTS01000075.1 Escherichia coli strain MEX-15 scaffold76_size2167, whole genome shotgun sequence (2167 bp)
Overview 1 RT 1: 92-2166 bp Neighborhood of RT #1 [92, 2166] RVT-GII GIIM Feature: gene Location: 92-1615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-1097 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1370 bp Feature: domain Description: GIIM Note: maturase Location: 1172 -1370 bp Feature: gene Location: 1909-2166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)