myRT

myRT report for GCA_013359135.1_ASM1335913v1

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Seq: JABWCN010000063.1 Bdellovibrionaceae bacterium isolate MAG_57 scaffold_3903, whole genome shotgun sequence (16293 bp)
Overview 1 RT 1: 12979-16264 bp Neighborhood of RT #1 [12979, 16290] Fic RVT-GII Intron_maturas2 HNHc T7_EssCb_Firm Feature: gene Location: 12979-13689 bp Feature: domain Description: Fic Location: 13363-13582 bp Feature: domain Description: Fic Location: 1 3363-1 3582 bp Feature: gene Location: 13752-14129 bp Feature: gene Location: 14129-15985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14402-15236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4402-1 5236 bp Feature: domain Description: Intron_maturas2 Location: 15347-15584 bp Feature: domain Description: Intron_maturas2 Location: 1 5347-1 5584 bp Feature: domain Description: HNHc Note: nucleases Location: 15788-15944 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5788-1 5944 bp Feature: gene Location: 15991-16290 bp Feature: domain Description: T7_EssCb_Firm Location: 16066-16264 bp Feature: domain Description: T7_EssCb_Firm Location: 1 6066-1 6264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fic (pfam02661), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), T7_EssCb_Firm (TIGR03928)

Seq: JABWCN010000027.1 Bdellovibrionaceae bacterium isolate MAG_57 scaffold_393, whole genome shotgun sequence (60001 bp)
Overview 1 RT 1: 21399-27036 bp Neighborhood of RT #1 [21399, 27065] TraC-F-type RVT-GII GIIM TrbC Feature: gene Location: 21399-22085 bp Feature: gene Location: 22104-24518 bp Feature: domain Description: TraC-F-type Location: 22266-24453 bp Feature: domain Description: TraC-F-type Location: 2 2 2 66-2 4453 bp Feature: gene Location: 24974-26179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25118-25796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5118-2 5796 bp Feature: domain Description: GIIM Note: maturase Location: 25877-26096 bp Feature: domain Description: GIIM Note: maturase Location: 2 5877-2 6096 bp Feature: gene Location: 26232-26750 bp Feature: gene Location: 26754-27065 bp Feature: domain Description: TrbC Location: 26784-27036 bp Feature: domain Description: TrbC Location: 2 6784-2 7036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, GIIM (pfam08388), TrbC (pfam04956)

Seq: JABWCN010000028.1 Bdellovibrionaceae bacterium isolate MAG_57 scaffold_396, whole genome shotgun sequence (59761 bp)
Overview 1 RT 1: 3135-12198 bp Neighborhood of RT #1 [3135, 12198] COG2810 N6_Mtase TaqI_C RVT-UNC DEDDh Feature: gene Location: 3135-3464 bp Feature: gene Location: 3598-6879 bp Feature: domain Description: COG2810 Location: 3751-4045 bp Feature: domain Description: COG2810 Location: 3 751-4045 bp Feature: domain Description: N6_Mtase Location: 4726-5650 bp Feature: domain Description: N6_Mtase Location: 4726-5650 bp Feature: domain Description: TaqI_C Location: 6271-6544 bp Feature: domain Description: TaqI_C Location: 6271-6544 bp Feature: gene Location: 7621-11142 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8227-8458 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8227-8458 bp Feature: gene Location: 11164-11868 bp Feature: domain Description: DEDDh Location: 11182-11656 bp Feature: domain Description: DEDDh Location: 11182-11656 bp Feature: gene Location: 12013-12198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2810 (Predicted type IV restriction endonuclease ), N6_Mtase (pfam02384), TaqI_C (pfam12950), RVT-UG11/RVT-Retrons/RVT-UG1/RVT-DGRs(RVT-UNC), DEDDh (cd06127)