myRT

myRT report for GCA_013359445.1_ASM1335944v1

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Seq: JABWBV010000242.1 Anaerolineales bacterium isolate MAG_39 scaffold_8439, whole genome shotgun sequence (9719 bp)
Overview 1 RT 1: 5113-9685 bp Neighborhood of RT #1 [5113, 9717] RVT-GII GIIM HNHc PEP_TPR_lipo SF2_C_SNF Feature: gene Location: 5113-5550 bp Feature: gene Location: 6322-6765 bp Feature: gene Location: 6854-8617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7154-7838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 54-7838 bp Feature: domain Description: GIIM Note: maturase Location: 7892-8120 bp Feature: domain Description: GIIM Note: maturase Location: 7892-81 20 bp Feature: domain Description: HNHc Note: nucleases Location: 8408-8573 bp Feature: domain Description: HNHc Note: nucleases Location: 8408-8573 bp Feature: gene Location: 9181-9717 bp Feature: domain Description: PEP_TPR_lipo Location: 9190-9298 bp Feature: domain Description: PEP_TPR_lipo Location: 91 90-9298 bp Feature: domain Description: SF2_C_SNF Location: 9340-9685 bp Feature: domain Description: SF2_C_SNF Location: 9340-9685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), PEP_TPR_lipo (TIGR02917), SF2_C_SNF (cd18793)

Seq: JABWBV010000281.1 Anaerolineales bacterium isolate MAG_39 scaffold_9644, whole genome shotgun sequence (8865 bp)
Overview 1 RT 1: 1-3851 bp Neighborhood of RT #1 [1, 3871] Cas2_I_II_III Cas1_I-II-III Cas1_I-II-III RVT-CRISPR RVT-CRISPR DUF370 RNase_HI_like Feature: gene Location: 1-180 bp Feature: domain Description: Cas2_I_II_III Location: 19-169 bp Feature: domain Description: Cas2 _I_II_III Location: 19-169 bp Feature: gene Location: 262-1380 bp Feature: domain Description: Cas1_I-II-III Location: 271-1069 bp Feature: domain Description: Cas1_I-II-III Location: 2 71-1069 bp Feature: domain Description: Cas1_I-II-III Location: 1192-1345 bp Feature: domain Description: Cas1_I-II-III Location: 1192 -1345 bp Feature: gene Location: 1470-2816 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1716-2049 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1716-2 049 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2526-2799 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 52 6-2 799 bp Feature: gene Location: 2845-3129 bp Feature: domain Description: DUF370 Location: 2881-3058 bp Feature: domain Description: DUF370 Location: 2 881-3058 bp Feature: gene Location: 3425-3871 bp Feature: domain Description: RNase_HI_like Location: 3479-3851 bp Feature: domain Description: RNase_HI_like Location: 3479-3851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, DUF370 (pfam04025), RNase_HI_like (cd09279)