myRT

myRT report for GCA_013359545.1_ASM1335954v1

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Seq: JABFMO010000023.1 Pseudomonas corrugata strain C8A5 NODE_23_length_95949_cov_25.386083, whole genome shotgun sequence (95949 bp)
Overview 1 RT 1: 81622-86692 bp Neighborhood of RT #1 [81622, 86703] RVT-UG12 MvaT_DBD ImmA ImmA Feature: gene Location: 81622-82005 bp Feature: gene Location: 82015-83232 bp Feature: gene Location: 83272-85008 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 83608-84064 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 83608-84064 bp Feature: gene Location: 85506-85874 bp Feature: domain Description: MvaT_DBD Location: 85746-85866 bp Feature: domain Description: MvaT_DBD Location: 85746-85866 bp Feature: gene Location: 86011-86703 bp Feature: domain Description: ImmA Location: 86218-86470 bp Feature: domain Description: ImmA Location: 8621 8-86470 bp Feature: domain Description: ImmA Location: 86599-86692 bp Feature: domain Description: ImmA Location: 86599-86692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, MvaT_DBD (cl40688), ImmA (COG2856)

Seq: JABFMO010000039.1 Pseudomonas corrugata strain C8A5 NODE_39_length_48681_cov_33.876033, whole genome shotgun sequence (48681 bp)
Overview 1 RT 1: 21085-27988 bp Neighborhood of RT #1 [21085, 28062] GATase_4 RVT_N RVT-GII GIIM HNH PtrB CAP_ED Feature: gene Location: 21085-21861 bp Feature: domain Description: GATase_4 Location: 21088-21850 bp Feature: domain Description: GATase_4 Location: 2 1088-2 1850 bp Feature: gene Location: 21894-22394 bp Feature: gene Location: 22490-24187 bp Feature: domain Description: RVT_N Location: 22547-22790 bp Feature: domain Description: RVT_N Location: 2 2 547-2 2 790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22835-23471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 835-2 3471 bp Feature: domain Description: GIIM Note: maturase Location: 23522-23756 bp Feature: domain Description: GIIM Note: maturase Location: 2 352 2 -2 3756 bp Feature: domain Description: HNH Note: nucleases Location: 24008-24146 bp Feature: domain Description: HNH Note: nucleases Location: 2 4008-2 4146 bp Feature: gene Location: 25332-27386 bp Feature: domain Description: PtrB Location: 25377-27378 bp Feature: domain Description: PtrB Location: 2 5377-2 7378 bp Feature: gene Location: 27589-28062 bp Feature: domain Description: CAP_ED Location: 27673-27988 bp Feature: domain Description: CAP_ED Location: 2 7673-2 7988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GATase_4 (pfam13230), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PtrB (COG1770), CAP_ED (cl00047)