myRT

myRT report for GCA_013359695.1_ASM1335969v1

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Seq: JABFMU010000116.1 Pseudomonas sp. C2B4 NODE_116_length_5654_cov_29.430970, whole genome shotgun sequence (5654 bp)
Overview 1 RT 1: 502-4053 bp Neighborhood of RT #1 [502, 4217] RVT-UG4 PRK06188 hydroxyacyl-CoA-like_DH_SDR_c-like Feature: gene Location: 502-849 bp Feature: gene Location: 1014-1505 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1020-1350 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 020-1 350 bp Feature: gene Location: 1636-3207 bp Feature: domain Description: PRK06188 Location: 1684-3202 bp Feature: domain Description: PRK061 88 Location: 1 684-3202 bp Feature: gene Location: 3291-4217 bp Feature: domain Description: hydroxyacyl-CoA-like_DH_SDR_c-like Location: 3309-4053 bp Feature: domain Description: hydroxyacyl-CoA-like_DH_SDR_c-like Location: 3309-4053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PRK06188 (acyl-CoA synthetase; Validated), hydroxyacyl-CoA-like_DH_SDR_c-like (cd05353)

Seq: JABFMU010000004.1 Pseudomonas sp. C2B4 NODE_4_length_263709_cov_38.930708, whole genome shotgun sequence (263709 bp)
Overview 1 RT 1: 89026-102377 bp Neighborhood of RT #1 [89026, 102377] hypoth_ymh RVT-Retrons Trypsin_2 SpoVT_AbrB AbiJ_NTD3 Abi_C RVT-UG5 nitrilase Feature: gene Location: 89026-89223 bp Feature: gene Location: 89523-90347 bp Feature: domain Description: hypoth_ymh Location: 89949-90312 bp Feature: domain Description: hypoth_ymh Location: 89949-90312 bp Feature: gene Location: 90488-92179 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90638-91256 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90638-912 56 bp Feature: domain Description: Trypsin_2 Location: 91652-92084 bp Feature: domain Description: Trypsin_2 Location: 91652 -92 084 bp Feature: gene Location: 92543-92908 bp Feature: gene Location: 93017-93454 bp Feature: gene Location: 94804-94992 bp Feature: domain Description: SpoVT_AbrB Location: 94879-94978 bp Feature: domain Description: SpoVT_AbrB Location: 94879-94978 bp Feature: gene Location: 95081-96310 bp Feature: domain Description: AbiJ_NTD3 Location: 95414-95906 bp Feature: domain Description: AbiJ_NTD3 Location: 95414-95906 bp Feature: domain Description: Abi_C Location: 96041-96275 bp Feature: domain Description: Abi_C Location: 96041-962 75 bp Feature: gene Location: 96507-99521 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 96984-97476 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 96984-97476 bp Feature: domain Description: nitrilase Location: 98727-99414 bp Feature: domain Description: nitrilase Location: 9872 7-99414 bp Feature: gene Location: 99830-100381 bp Feature: gene Location: 100803-102377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hypoth_ymh (TIGR02391), RVT-Retrons, Trypsin_2 (pfam13365), SpoVT_AbrB (smart00966), AbiJ_NTD3 (pfam18860), Abi_C (pfam14355), RVT-UG5, nitrilase (cl11424)