myRT

myRT report for GCA_013359935.1_ASM1335993v1

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Seq: JABMCB010000088.1 Paenibacillus xylanilyticus strain LMG 21957 k141_133, whole genome shotgun sequence (2594 bp)
Overview 1 RT 1: 101-2275 bp Neighborhood of RT #1 [101, 2275] RVT-GII HNHc Feature: gene Location: 101-1684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182-878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 82-878 bp Feature: domain Description: HNHc Note: nucleases Location: 1433-1571 bp Feature: domain Description: HNHc Note: nucleases Location: 1 433-1 571 bp Feature: gene Location: 2039-2275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JABMCB010000176.1 Paenibacillus xylanilyticus strain LMG 21957 k141_255, whole genome shotgun sequence (105374 bp)
Overview 1 RT 1: 80279-90634 bp Neighborhood of RT #1 [80279, 90648] DEXHc_Snf DEXHc_Snf KOG1000 RVT-GII HNHc HsdM RVT-GII GIIM HNHc LysM Feature: gene Location: 80279-83674 bp Feature: domain Description: DEXHc_Snf Location: 81311-81671 bp Feature: domain Description: DEXHc_Snf Location: 81311-81671 bp Feature: domain Description: DEXHc_Snf Location: 82100-82229 bp Feature: domain Description: DEXHc_Snf Location: 82 100-82 2 2 9 bp Feature: domain Description: KOG1000 Location: 82877-83384 bp Feature: domain Description: KOG1000 Location: 82 877-83384 bp Feature: gene Location: 83734-83922 bp Feature: gene Location: 84006-85865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84324-85029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8432 4-8502 9 bp Feature: domain Description: HNHc Note: nucleases Location: 85623-85791 bp Feature: domain Description: HNHc Note: nucleases Location: 8562 3-85791 bp Feature: gene Location: 86588-87502 bp Feature: domain Description: HsdM Location: 86627-86810 bp Feature: domain Description: HsdM Location: 8662 7-86810 bp Feature: gene Location: 87602-89482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87899-88604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87899-88604 bp Feature: domain Description: GIIM Note: maturase Location: 88778-88913 bp Feature: domain Description: GIIM Note: maturase Location: 88778-88913 bp Feature: domain Description: HNHc Note: nucleases Location: 89234-89393 bp Feature: domain Description: HNHc Note: nucleases Location: 892 34-89393 bp Feature: gene Location: 89527-89655 bp Feature: gene Location: 90298-90648 bp Feature: domain Description: LysM Location: 90496-90634 bp Feature: domain Description: LysM Location: 90496-90634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXHc_Snf (cd17919), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, HNHc (smart00507), HsdM (COG0286), GIIM (pfam08388), LysM (smart00257)