myRT

myRT report for GCA_013360315.1_ASM1336031v1

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Seq: JABWBY010000025.1 Bryobacteraceae bacterium isolate MAG_42 scaffold_1377, whole genome shotgun sequence (29758 bp)
Overview 1 RT 1: 15917-20643 bp Neighborhood of RT #1 [15917, 20684] Aldo_ket_red RVT-GII Alpha_L_fucos Sigma70_r4 Feature: gene Location: 15917-16882 bp Feature: domain Description: Aldo_ket_red Location: 16022-16820 bp Feature: domain Description: Aldo_ket_red Location: 1 6022-1 6820 bp Feature: gene Location: 16952-17128 bp Feature: gene Location: 17257-18735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17671-18361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7671 -1 8361 bp Feature: gene Location: 18849-20156 bp Feature: domain Description: Alpha_L_fucos Location: 18924-19890 bp Feature: domain Description: Alpha_L_fucos Location: 1 8924-1 9890 bp Feature: gene Location: 20517-20684 bp Feature: domain Description: Sigma70_r4 Location: 20556-20643 bp Feature: domain Description: Sigma70_r4 Location: 20556-20643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aldo_ket_red (pfam00248), RVT-GII, Alpha_L_fucos (smart00812), Sigma70_r4 (pfam04545)

Seq: JABWBY010000370.1 Bryobacteraceae bacterium isolate MAG_42 scaffold_31340, whole genome shotgun sequence (3723 bp)
Overview 1 RT 1: 42-3255 bp Neighborhood of RT #1 [42, 3722] RVT-GII rve_3 Feature: gene Location: 42-998 bp Feature: gene Location: 1153-2493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1435-2122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1435-2 12 2 bp Feature: gene Location: 2979-3722 bp Feature: domain Description: rve_3 Location: 3060-3255 bp Feature: domain Description: rve_3 Location: 3060-32 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve_3 (pfam13683)

Seq: JABWBY010000215.1 Bryobacteraceae bacterium isolate MAG_42 scaffold_9328, whole genome shotgun sequence (9098 bp)
Overview 1 RT 1: 3303-7553 bp Neighborhood of RT #1 [3303, 8122] TnpB_IS66 RVT-GII Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 3303-3464 bp Feature: domain Description: TnpB_IS66 Location: 3330-3459 bp Feature: domain Description: TnpB_IS66 Location: 3 3 3 0-3 459 bp Feature: gene Location: 3461-3868 bp Feature: gene Location: 3974-5428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4718-5330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4718-53 3 0 bp Feature: gene Location: 5460-5801 bp Feature: gene Location: 6392-8122 bp Feature: domain Description: Resolvase Location: 6413-6860 bp Feature: domain Description: Resolvase Location: 6413 -6860 bp Feature: domain Description: Recombinase Location: 6974-7313 bp Feature: domain Description: Recombinase Location: 6974-73 13 bp Feature: domain Description: Zn_ribbon_recom Location: 7385-7553 bp Feature: domain Description: Zn_ribbon_recom Location: 73 85-7553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)