myRT

myRT report for GCA_013360405.1_ASM1336040v1

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Seq: JABWBR010000066.1 Saprospiraceae bacterium isolate MAG_35 scaffold_1273, whole genome shotgun sequence (58025 bp)
Overview 1 RT 1: 23247-28993 bp Neighborhood of RT #1 [23247, 29034] TIR RocCOR COR TIR_2 RVT-DGRs HRDC pfam03781 Feature: gene Location: 23247-23603 bp Feature: domain Description: TIR Location: 23262-23580 bp Feature: domain Description: TIR Location: 23262-23580 bp Feature: gene Location: 23624-26149 bp Feature: domain Description: RocCOR Location: 24218-24599 bp Feature: domain Description: RocCOR Location: 2421 8-24599 bp Feature: domain Description: COR Location: 24743-25355 bp Feature: domain Description: COR Location: 24743-25355 bp Feature: domain Description: TIR_2 Location: 25712-26033 bp Feature: domain Description: TIR_2 Location: 2571 2-26033 bp Feature: gene Location: 26424-27422 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26634-27216 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26634-2721 6 bp Feature: gene Location: 27385-27852 bp Feature: domain Description: HRDC Location: 27616-27799 bp Feature: domain Description: HRDC Location: 2761 6-27799 bp Feature: gene Location: 28093-29034 bp Feature: domain Description: pfam03781 Location: 28309-28993 bp Feature: domain Description: pfam03781 Location: 28309-28993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR (smart00255), RocCOR (cd09914), COR (pfam16095), TIR_2 (pfam13676), RVT-DGRs, HRDC (smart00341), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: JABWBR010000085.1 Saprospiraceae bacterium isolate MAG_35 scaffold_1974, whole genome shotgun sequence (67192 bp)
Overview 1 RT 1: 21683-27011 bp Neighborhood of RT #1 [21683, 27019] pfam03781 HRDC RVT-DGRs KOG1185 Feature: gene Location: 21683-23290 bp Feature: domain Description: pfam03781 Location: 22532-23279 bp Feature: domain Description: pfam03781 Location: 2 2 532 -2 32 79 bp Feature: gene Location: 23459-23920 bp Feature: domain Description: HRDC Location: 23699-23879 bp Feature: domain Description: HRDC Location: 2 3699-2 3879 bp Feature: gene Location: 23895-24890 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24105-24687 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 4105-2 4687 bp Feature: gene Location: 24901-25053 bp Feature: gene Location: 25295-27019 bp Feature: domain Description: KOG1185 Location: 25298-27011 bp Feature: domain Description: KOG1185 Location: 2 52 98-2 7011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), HRDC (smart00341), RVT-DGRs, KOG1185 (KOG1185, Thiamine pyrophosphate-requiring enzyme )

Seq: JABWBR010000013.1 Saprospiraceae bacterium isolate MAG_35 scaffold_214, whole genome shotgun sequence (79157 bp)
Overview 1 RT 1: 74142-77587 bp Neighborhood of RT #1 [74142, 77622] RVT-Retrons Cas2 Cas1_I-II-III Feature: gene Location: 74142-74318 bp Feature: gene Location: 74570-74821 bp Feature: gene Location: 75242-76240 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75413-75992 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75413 -75992 bp Feature: gene Location: 76262-76597 bp Feature: domain Description: Cas2 Location: 76310-76562 bp Feature: domain Description: Cas2 Location: 763 10-76562 bp Feature: gene Location: 76594-77622 bp Feature: domain Description: Cas1_I-II-III Location: 76597-77587 bp Feature: domain Description: Cas1_I-II-III Location: 76597-77587 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Cas2 (COG3512), Cas1_I-II-III (cl00656)

Seq: JABWBR010000027.1 Saprospiraceae bacterium isolate MAG_35 scaffold_457, whole genome shotgun sequence (85428 bp)
Overview 1 RT 1: 51796-54879 bp Neighborhood of RT #1 [51796, 54977] Acetyltransf_8 YfmG RVT-DGRs Avd_like HRDC Feature: gene Location: 51796-52281 bp Feature: domain Description: Acetyltransf_8 Location: 51826-52237 bp Feature: domain Description: Acetyltransf_8 Location: 51826-52237 bp Feature: gene Location: 52727-52996 bp Feature: domain Description: YfmG Location: 52745-52868 bp Feature: domain Description: YfmG Location: 5274 5-52868 bp Feature: gene Location: 53109-54113 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53319-53907 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53319-53907 bp Feature: gene Location: 54106-54456 bp Feature: domain Description: Avd_like Location: 54136-54439 bp Feature: domain Description: Avd_like Location: 54 136-54 4 39 bp Feature: gene Location: 54468-54977 bp Feature: domain Description: HRDC Location: 54687-54879 bp Feature: domain Description: HRDC Location: 54 687-54 879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_8 (pfam13523), YfmG (COG1262), RVT-DGRs, Avd_like (cd16376), HRDC (smart00341)

Seq: JABWBR010000042.1 Saprospiraceae bacterium isolate MAG_35 scaffold_736, whole genome shotgun sequence (56027 bp)
Overview 1 RT 1: 27702-31255 bp Neighborhood of RT #1 [27702, 31255] YfmG RVT-DGRs HRDC Feature: gene Location: 27702-29288 bp Feature: gene Location: 29484-29618 bp Feature: domain Description: YfmG Location: 29490-29610 bp Feature: domain Description: YfmG Location: 29490-29610 bp Feature: gene Location: 29659-30666 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29869-30454 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29869-3045 4 bp Feature: gene Location: 30641-31102 bp Feature: domain Description: HRDC Location: 30878-31061 bp Feature: domain Description: HRDC Location: 30878-31061 bp Feature: gene Location: 31115-31255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, HRDC (smart00341)