myRT

myRT report for GCA_013360665.1_ASM1336066v1

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Seq: JABWBE010000187.1 Polyangiaceae bacterium isolate MAG_22 scaffold_3962, whole genome shotgun sequence (16104 bp)
Overview 1 RT 1: 3-9506 bp Neighborhood of RT #1 [3, 9562] HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 EZ_HEAT HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 COG4715 RVT-Retrons SpoIIAA-like Feature: gene Location: 3-4679 bp Feature: domain Description: HEAT_2 Location: 15-237 bp Feature: domain Description: HEAT_2 Location: 1 5-237 bp Feature: domain Description: HEAT_2 Location: 306-555 bp Feature: domain Description: HEAT_2 Location: 306-555 bp Feature: domain Description: HEAT_2 Location: 612-756 bp Feature: domain Description: HEAT_2 Location: 61 2-756 bp Feature: domain Description: HEAT_2 Location: 936-1062 bp Feature: domain Description: HEAT_2 Location: 936-1 062 bp Feature: domain Description: HEAT_2 Location: 1092-1263 bp Feature: domain Description: HEAT_2 Location: 1 092-1 263 bp Feature: domain Description: HEAT_2 Location: 1338-1491 bp Feature: domain Description: HEAT_2 Location: 1 338-1 491 bp Feature: domain Description: HEAT_2 Location: 1983-2166 bp Feature: domain Description: HEAT_2 Location: 1 983-21 66 bp Feature: domain Description: HEAT_2 Location: 2214-2415 bp Feature: domain Description: HEAT_2 Location: 221 4-241 5 bp Feature: domain Description: EZ_HEAT Location: 2511-2586 bp Feature: domain Description: EZ_HEAT Location: 251 1 -2586 bp Feature: domain Description: HEAT_2 Location: 2619-2811 bp Feature: domain Description: HEAT_2 Location: 261 9-281 1 bp Feature: domain Description: HEAT_2 Location: 3060-3264 bp Feature: domain Description: HEAT_2 Location: 3060-3264 bp Feature: domain Description: HEAT_2 Location: 3303-3498 bp Feature: domain Description: HEAT_2 Location: 3303-3498 bp Feature: domain Description: HEAT_2 Location: 3513-3645 bp Feature: domain Description: HEAT_2 Location: 351 3-3645 bp Feature: domain Description: HEAT_2 Location: 4062-4281 bp Feature: domain Description: HEAT_2 Location: 4062-4281 bp Feature: domain Description: HEAT_2 Location: 4455-4635 bp Feature: domain Description: HEAT_2 Location: 4455-4635 bp Feature: gene Location: 4745-6538 bp Feature: domain Description: COG4715 Location: 6137-6341 bp Feature: domain Description: COG471 5 Location: 61 37-6341 bp Feature: gene Location: 6985-8439 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7534-8176 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7534-81 76 bp Feature: gene Location: 8708-9073 bp Feature: gene Location: 9137-9562 bp Feature: domain Description: SpoIIAA-like Location: 9197-9506 bp Feature: domain Description: SpoIIAA-like Location: 91 97-9506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), EZ_HEAT (smart00567), COG4715 (Uncharacterized conserved protein, contains Zn finger domain ), RVT-Retrons, SpoIIAA-like (pfam11964)

Seq: JABWBE010000006.1 Polyangiaceae bacterium isolate MAG_22 scaffold_554, whole genome shotgun sequence (54474 bp)
Overview 1 RT 1: 8128-16685 bp Neighborhood of RT #1 [8128, 16685] HEAT_2 SWIM RVT-Retrons ADP_ribosyl_GH Feature: gene Location: 8128-10725 bp Feature: domain Description: HEAT_2 Location: 8386-8623 bp Feature: domain Description: HEAT_2 Location: 8386-862 3 bp Feature: gene Location: 10722-12407 bp Feature: domain Description: SWIM Location: 12285-12366 bp Feature: domain Description: SWIM Location: 12 2 85-12 366 bp Feature: gene Location: 12831-14216 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13371-13983 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13371-13983 bp Feature: gene Location: 14239-15588 bp Feature: domain Description: ADP_ribosyl_GH Location: 14647-15502 bp Feature: domain Description: ADP_ribosyl_GH Location: 14647-15502 bp Feature: gene Location: 15621-16685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), RVT-Retrons, ADP_ribosyl_GH (pfam03747), HEAT_2 (pfam13646)

Seq: JABWBE010000011.1 Polyangiaceae bacterium isolate MAG_22 scaffold_719, whole genome shotgun sequence (42885 bp)
Overview 1 RT 1: 23493-29358 bp Neighborhood of RT #1 [23493, 29372] RVT-GII MPP_YkuE_C Feature: gene Location: 23493-23942 bp Feature: gene Location: 24366-24857 bp Feature: gene Location: 24896-26218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25178-25859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25178-25859 bp Feature: gene Location: 27273-27998 bp Feature: gene Location: 28065-29372 bp Feature: domain Description: MPP_YkuE_C Location: 28686-29358 bp Feature: domain Description: MPP_YkuE_C Location: 28686-293 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MPP_YkuE_C (cd07385)

Seq: JABWBE010000376.1 Polyangiaceae bacterium isolate MAG_22 scaffold_8709, whole genome shotgun sequence (9526 bp)
Overview 1 RT 1: 249-6710 bp Neighborhood of RT #1 [249, 6961] Mrr_cat RVT-GII GIIM YbbA Feature: gene Location: 249-1046 bp Feature: gene Location: 1253-3097 bp Feature: domain Description: Mrr_cat Location: 1361-1673 bp Feature: domain Description: Mrr_cat Location: 1361-1673 bp Feature: gene Location: 3214-4761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3520-4300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3520-4 300 bp Feature: domain Description: GIIM Note: maturase Location: 4375-4609 bp Feature: domain Description: GIIM Note: maturase Location: 4 375-4 609 bp Feature: gene Location: 5391-5930 bp Feature: gene Location: 5831-6961 bp Feature: domain Description: YbbA Location: 6173-6710 bp Feature: domain Description: YbbA Location: 6173-6710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YbbA (COG4181)