myRT

myRT report for GCA_013360945.1_ASM1336094v1

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Seq: JABWAQ010000145.1 Candidatus Brocadia sp. isolate MAG_8 scaffold_17023, whole genome shotgun sequence (11962 bp)
Overview 1 RT 1: 9732-11928 bp Neighborhood of RT #1 [9732, 11960] RVT-GII KOG4768 Feature: gene Location: 9732-10349 bp Feature: gene Location: 10540-10740 bp Feature: gene Location: 10956-11960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11148-11688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 48-1 1 688 bp Feature: domain Description: KOG4768 Location: 11814-11928 bp Feature: domain Description: KOG4768 Location: 1 1 81 4-1 1 928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: JABWAQ010000052.1 Candidatus Brocadia sp. isolate MAG_8 scaffold_1805, whole genome shotgun sequence (33941 bp)
Overview 1 RT 1: 9267-13114 bp Neighborhood of RT #1 [9267, 13114] pfam03781 Avd_like RVT-DGRs Feature: gene Location: 9267-10802 bp Feature: domain Description: pfam03781 Location: 9933-10773 bp Feature: domain Description: pfam03781 Location: 9933-10773 bp Feature: gene Location: 11049-11429 bp Feature: domain Description: Avd_like Location: 11109-11418 bp Feature: domain Description: Avd_like Location: 11109-11418 bp Feature: gene Location: 12290-12706 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12323-12491 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 32 3-12 491 bp Feature: gene Location: 12721-12882 bp Feature: gene Location: 12974-13114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs

Seq: JABWAQ010000064.1 Candidatus Brocadia sp. isolate MAG_8 scaffold_2442, whole genome shotgun sequence (21686 bp)
Overview 1 RT 1: 18739-21302 bp Neighborhood of RT #1 [18739, 21370] HicA_toxin RVT-DGRs HRDC Feature: gene Location: 18739-18999 bp Feature: domain Description: HicA_toxin Location: 18814-18952 bp Feature: domain Description: HicA_toxin Location: 18814-18952 bp Feature: gene Location: 19135-19422 bp Feature: gene Location: 19520-20539 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19730-20318 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1973 0-203 18 bp Feature: gene Location: 20698-20862 bp Feature: gene Location: 20891-21370 bp Feature: domain Description: HRDC Location: 21110-21302 bp Feature: domain Description: HRDC Location: 21110-213 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicA_toxin (pfam07927), RVT-DGRs, HRDC (smart00341)

Seq: JABWAQ010000179.1 Candidatus Brocadia sp. isolate MAG_8 scaffold_35578, whole genome shotgun sequence (3371 bp)
Overview 1 RT 1: 580-3003 bp Neighborhood of RT #1 [580, 3077] HicA_toxin RVT-GII RVT-GII GIIM Feature: gene Location: 580-777 bp Feature: domain Description: HicA_toxin Location: 604-751 bp Feature: domain Description: HicA_toxin Location: 604 -751 bp Feature: gene Location: 1312-1794 bp Feature: gene Location: 1839-2186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2049-2184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204 9-2184 bp Feature: gene Location: 2253-3077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2256-2706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2256-2706 bp Feature: domain Description: GIIM Note: maturase Location: 2793-3003 bp Feature: domain Description: GIIM Note: maturase Location: 2793-3003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicA_toxin (pfam07927), RVT-GII, GIIM (pfam08388)

Seq: JABWAQ010000013.1 Candidatus Brocadia sp. isolate MAG_8 scaffold_618, whole genome shotgun sequence (79345 bp)
Overview 1 RT 1: 34242-38090 bp Neighborhood of RT #1 [34242, 38090] RVT-GII Feature: gene Location: 34242-34562 bp Feature: gene Location: 34777-34995 bp Feature: gene Location: 35226-35942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35376-35817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 376-35 817 bp Feature: gene Location: 36094-36372 bp Feature: gene Location: 36768-38090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII