myRT

myRT report for GCA_013361015.1_ASM1336101v1

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Seq: JABWAN010000406.1 Candidate division KSB1 bacterium isolate MAG_5 scaffold_17315, whole genome shotgun sequence (5820 bp)
Overview 1 RT 1: 73-5453 bp Neighborhood of RT #1 [73, 5455] DUF1566 RVT-DGRs MutS_I Avd_like DUF1566 Feature: gene Location: 73-1290 bp Feature: domain Description: DUF1566 Location: 952-1288 bp Feature: domain Description: DUF1 566 Location: 952-1 288 bp Feature: gene Location: 1307-2782 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1484-2174 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 484-21 74 bp Feature: domain Description: MutS_I Location: 2480-2747 bp Feature: domain Description: MutS_I Location: 2480-2747 bp Feature: gene Location: 3093-3497 bp Feature: domain Description: Avd_like Location: 3120-3429 bp Feature: domain Description: Avd_like Location: 31 20-3429 bp Feature: gene Location: 3623-5455 bp Feature: domain Description: DUF1566 Location: 5117-5453 bp Feature: domain Description: DUF1 566 Location: 51 1 7-5453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, MutS_I (pfam01624), Avd_like (cd16376)

Seq: JABWAN010000456.1 Candidate division KSB1 bacterium isolate MAG_5 scaffold_19073, whole genome shotgun sequence (5412 bp)
Overview 1 RT 1: 3-938 bp Neighborhood of RT #1 [3, 988] RVT-DGRs Avd_like Feature: gene Location: 3-614 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 210-615 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 10-615 bp Feature: gene Location: 306-554 bp Feature: gene Location: 611-988 bp Feature: domain Description: Avd_like Location: 635-938 bp Feature: domain Description: Avd_like Location: 635-938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: JABWAN010000578.1 Candidate division KSB1 bacterium isolate MAG_5 scaffold_23743, whole genome shotgun sequence (4598 bp)
Overview 1 RT 1: 95-2828 bp Neighborhood of RT #1 [95, 3037] RVT-GII GIIM Y2_Tnp Feature: gene Location: 95-1426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 80-1049 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1337 bp Feature: domain Description: GIIM Note: maturase Location: 1112-13 3 7 bp Feature: gene Location: 1905-2111 bp Feature: gene Location: 2366-3037 bp Feature: domain Description: Y2_Tnp Location: 2384-2828 bp Feature: domain Description: Y2_Tnp Location: 23 84-2828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Y2_Tnp (pfam04986)

Seq: JABWAN010001077.1 Candidate division KSB1 bacterium isolate MAG_5 scaffold_61252, whole genome shotgun sequence (2167 bp)
Overview 1 RT 1: 158-1694 bp Neighborhood of RT #1 [158, 1735] RVT-CRISPR-like UPF0175 COG5550 Feature: gene Location: 158-1027 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 380-992 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 380-992 bp Feature: gene Location: 1060-1335 bp Feature: domain Description: UPF0175 Location: 1084-1291 bp Feature: domain Description: UPF0175 Location: 1084 -1291 bp Feature: gene Location: 1370-1735 bp Feature: domain Description: COG5550 Location: 1373-1694 bp Feature: domain Description: COG5550 Location: 1373-1694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, UPF0175 (pfam03683), COG5550 (Predicted aspartyl protease )

Seq: JABWAN010001145.1 Candidate division KSB1 bacterium isolate MAG_5 scaffold_77508, whole genome shotgun sequence (1766 bp)
Overview 1 RT 1: 1-1678 bp Neighborhood of RT #1 [1, 1725] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 1-249 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4-202 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4-202 bp Feature: gene Location: 387-1370 bp Feature: domain Description: Cas1_I-II-III Location: 396-1338 bp Feature: domain Description: Cas1_I-II-III Location: 396-1338 bp Feature: gene Location: 1393-1725 bp Feature: domain Description: Cas2_I_II_III Location: 1462-1678 bp Feature: domain Description: Cas2_I_II_III Location: 1462-1678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)