myRT

myRT report for GCA_013361225.1_ASM1336122v1

Download annotations/find similar RTs

Seq: JABWDI010000025.1 Bacteroides uniformis strain A12 NODE_25_length_59576_cov_92.168142, whole genome shotgun sequence (59576 bp)
Overview 1 RT 1: 54162-58892 bp Neighborhood of RT #1 [54162, 59509] RVT_N RVT-GII GIIM COG4646 Feature: gene Location: 54162-54560 bp Feature: gene Location: 55085-56218 bp Feature: gene Location: 56172-57839 bp Feature: domain Description: RVT_N Location: 56226-56469 bp Feature: domain Description: RVT_N Location: 56226-56469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56514-57162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5651 4-571 62 bp Feature: domain Description: GIIM Note: maturase Location: 57216-57447 bp Feature: domain Description: GIIM Note: maturase Location: 5721 6-57447 bp Feature: gene Location: 57821-58135 bp Feature: gene Location: 58496-59509 bp Feature: domain Description: COG4646 Location: 58502-58892 bp Feature: domain Description: COG4646 Location: 58502-58892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: JABWDI010000028.1 Bacteroides uniformis strain A12 NODE_28_length_40677_cov_96.934961, whole genome shotgun sequence (40677 bp)
Overview 1 RT 1: 10886-15477 bp Neighborhood of RT #1 [10886, 15491] DUF1738 MPTase-PolyVal RVT-GII Intron_maturas2 DUF1738 Feature: gene Location: 10886-11254 bp Feature: gene Location: 11313-12929 bp Feature: domain Description: DUF1738 Location: 11439-11715 bp Feature: domain Description: DUF1738 Location: 11439-11715 bp Feature: domain Description: MPTase-PolyVal Location: 11877-12189 bp Feature: domain Description: MPTase-PolyVal Location: 11877-12 189 bp Feature: gene Location: 12922-14727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13186-14008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13186-14008 bp Feature: domain Description: Intron_maturas2 Location: 14185-14407 bp Feature: domain Description: Intron_maturas2 Location: 14185-14407 bp Feature: gene Location: 15000-15233 bp Feature: gene Location: 15273-15491 bp Feature: domain Description: DUF1738 Location: 15327-15477 bp Feature: domain Description: DUF1738 Location: 1532 7-15477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), MPTase-PolyVal (pfam18818), RVT-GII, Intron_maturas2 (pfam01348)

Seq: JABWDI010000002.1 Bacteroides uniformis strain A12 NODE_2_length_347210_cov_96.760024, whole genome shotgun sequence (347210 bp)
Overview 1 RT 1: 202723-205931 bp Neighborhood of RT #1 [202723, 205931] RVT-UG27 Feature: gene Location: 202723-203001 bp Feature: gene Location: 203031-203297 bp Feature: gene Location: 203347-204609 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 203539-204175 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 203 53 9-204175 bp Feature: gene Location: 204602-205270 bp Feature: gene Location: 205284-205931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: JABWDI010000030.1 Bacteroides uniformis strain A12 NODE_30_length_29652_cov_80.417407, whole genome shotgun sequence (29652 bp)
Overview 1 RT 1: 6885-12194 bp Neighborhood of RT #1 [6885, 12211] DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 6885-7265 bp Feature: domain Description: DUF3876 Location: 6966-7230 bp Feature: domain Description: DUF3876 Location: 6966-7230 bp Feature: gene Location: 7306-9702 bp Feature: domain Description: Bac_Flav_CT_G Location: 7426-9685 bp Feature: domain Description: Bac_Flav_CT_G Location: 74 26-9685 bp Feature: gene Location: 9683-11410 bp Feature: domain Description: RVT_N Location: 9788-10031 bp Feature: domain Description: RVT_N Location: 9788-10031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10076-10724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10076-10724 bp Feature: domain Description: GIIM Note: maturase Location: 10775-11009 bp Feature: domain Description: GIIM Note: maturase Location: 10775-11009 bp Feature: gene Location: 11742-11897 bp Feature: gene Location: 11966-12211 bp Feature: domain Description: Bac_Flav_CT_G Location: 11969-12194 bp Feature: domain Description: Bac_Flav_CT_G Location: 11969-12194 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)