myRT

myRT report for GCA_013361275.1_ASM1336127v1

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Seq: JABANR010000005.1 Escherichia coli strain E192 contig00005, whole genome shotgun sequence (164005 bp)
Overview 1 RT 1: 135369-141400 bp Neighborhood of RT #1 [135369, 141400] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 135369-136289 bp Feature: domain Description: AbiEii Location: 135411-136152 bp Feature: domain Description: AbiEii Location: 1 3541 1 -1 361 52 bp Feature: gene Location: 136276-137079 bp Feature: domain Description: AbiEi_3_N Location: 136309-136570 bp Feature: domain Description: AbiEi_3_N Location: 1 36309-1 36570 bp Feature: domain Description: AbiEi_3 Location: 136582-137038 bp Feature: domain Description: AbiEi_3 Location: 1 36582-1 37038 bp Feature: gene Location: 137374-140583 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 137902-138391 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 37902-1 38391 bp Feature: domain Description: nitrilase Location: 139897-140494 bp Feature: domain Description: nitrilase Location: 1 39897-1 40494 bp Feature: gene Location: 140744-140884 bp Feature: domain Description: Phage_ASH Location: 140771-140864 bp Feature: domain Description: Phage_ASH Location: 1 40771 -1 40864 bp Feature: gene Location: 140930-141400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JABANR010000081.1 Escherichia coli strain E192 contig00081, whole genome shotgun sequence (8886 bp)
Overview 1 RT 1: 224-3639 bp Neighborhood of RT #1 [224, 3644] Tra5 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 224-655 bp Feature: domain Description: Tra5 Location: 230-647 bp Feature: domain Description: Tra5 Location: 2 30-647 bp Feature: gene Location: 766-996 bp Feature: gene Location: 1048-2289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1321-2053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 1-2 053 bp Feature: domain Description: GIIM Note: maturase Location: 2128-2284 bp Feature: domain Description: GIIM Note: maturase Location: 2 12 8-2 2 84 bp Feature: gene Location: 2881-3348 bp Feature: domain Description: PHA02517 Location: 2947-3286 bp Feature: domain Description: PHA02 517 Location: 2 947-32 86 bp Feature: gene Location: 3345-3644 bp Feature: domain Description: InsE Location: 3375-3639 bp Feature: domain Description: InsE Location: 3375-3639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)