myRT

myRT report for GCA_013363225.1_ASM1336322v1

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Seq: WUUG01000014.1 Escherichia coli strain MS6194 scf7180000000050, whole genome shotgun sequence (269683 bp)
Overview 1 RT 1: 257852-265334 bp Neighborhood of RT #1 [257852, 265876] prfC SLATT_5 RVT-UG17 Caudo_TAP phage_tail_N ABC_SMC2_euk Collar Feature: gene Location: 257852-259438 bp Feature: domain Description: prfC Location: 257870-259436 bp Feature: domain Description: prfC Location: 257870-259436 bp Feature: gene Location: 259969-260673 bp Feature: domain Description: SLATT_5 Location: 260131-260641 bp Feature: domain Description: SLATT_5 Location: 2601 31 -260641 bp Feature: gene Location: 260651-262021 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 260879-261485 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 260879-261 485 bp Feature: gene Location: 262134-262718 bp Feature: domain Description: Caudo_TAP Location: 262350-262707 bp Feature: domain Description: Caudo_TAP Location: 262350-262707 bp Feature: gene Location: 262718-265876 bp Feature: domain Description: phage_tail_N Location: 262721-263120 bp Feature: domain Description: phage_tail_N Location: 262721 -2631 20 bp Feature: domain Description: ABC_SMC2_euk Location: 263144-264152 bp Feature: domain Description: ABC_SMC2_euk Location: 2631 44-2641 52 bp Feature: domain Description: Collar Location: 265196-265334 bp Feature: domain Description: Collar Location: 2651 96-265334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), phage_tail_N (pfam08400), ABC_SMC2_euk (cd03273), Collar (pfam07484)

Seq: WUUG01000005.1 Escherichia coli strain MS6194 scf7180000000055, whole genome shotgun sequence (1956018 bp)
Overview 1 RT 1: 1840353-1843118 bp Neighborhood of RT #1 [1840353, 1843183] group_II_RT_mat RVT-GII PHA02517 Feature: gene Location: 1840353-1840532 bp Feature: gene Location: 1840645-1841217 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1840651-1840963 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1840651-1840963 bp Feature: gene Location: 1841210-1842166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1841483-1842119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1841483-1842 119 bp Feature: gene Location: 1842120-1842545 bp Feature: gene Location: 1842758-1843183 bp Feature: domain Description: PHA02517 Location: 1842779-1843118 bp Feature: domain Description: PHA02 517 Location: 1842 779-1843118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)