myRT

myRT report for GCA_013363345.1_ASM1336334v1

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Seq: JABWHY010000016.1 Escherichia coli strain MS6207 scf7180000000060, whole genome shotgun sequence (1262340 bp)
Overview 1 RT 1: 646493-651371 bp Neighborhood of RT #1 [646493, 651373] umuC PRK10276 RVT-GII hlyE Feature: gene Location: 646493-647761 bp Feature: domain Description: umuC Location: 646496-647759 bp Feature: domain Description: umuC Location: 646496-647759 bp Feature: gene Location: 647761-648180 bp Feature: domain Description: PRK10276 Location: 647764-648178 bp Feature: domain Description: PRK1 0276 Location: 647764-6481 78 bp Feature: gene Location: 648259-649746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 648664-649354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 648664-649354 bp Feature: gene Location: 649771-650157 bp Feature: gene Location: 650456-651373 bp Feature: domain Description: hlyE Location: 650465-651371 bp Feature: domain Description: hlyE Location: 650465-651 371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, hlyE (PRK11376)

Seq: JABWHY010000010.1 Escherichia coli strain MS6207 scf7180000000072, whole genome shotgun sequence (23523 bp)
Overview 1 RT 1: 16883-21492 bp Neighborhood of RT #1 [16883, 21492] Phage_GPA RVT-GII Feature: gene Location: 16883-19276 bp Feature: domain Description: Phage_GPA Location: 17450-18413 bp Feature: domain Description: Phage_GPA Location: 17450-18413 bp Feature: gene Location: 19497-20246 bp Feature: gene Location: 20068-20877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20149-20761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0149-2 0761 bp Feature: gene Location: 20975-21322 bp Feature: gene Location: 21334-21492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII

Seq: JABWHY010000013.1 Escherichia coli strain MS6207 scf7180000000080, whole genome shotgun sequence (187618 bp)
Overview 1 RT 1: 94961-99539 bp Neighborhood of RT #1 [94961, 99541] RVT-GII PRK08155 Feature: gene Location: 94961-95212 bp Feature: gene Location: 95400-95768 bp Feature: gene Location: 95793-97280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96198-96888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96198-96888 bp Feature: gene Location: 97344-97493 bp Feature: gene Location: 97853-99541 bp Feature: domain Description: PRK08155 Location: 97856-99539 bp Feature: domain Description: PRK08155 Location: 97856-9953 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK08155 (acetolactate synthase large subunit)

Seq: JABWHY010000015.1 Escherichia coli strain MS6207 scf7180000000086, whole genome shotgun sequence (153924 bp)
Overview 1 RT 1: 31507-35798 bp Neighborhood of RT #1 [31507, 35798] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 31507-32769 bp Feature: domain Description: YesM Location: 32020-32761 bp Feature: domain Description: YesM Location: 32020-32761 bp Feature: gene Location: 32799-32969 bp Feature: gene Location: 33319-33840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33325-33607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33325-33607 bp Feature: domain Description: GIIM Note: maturase Location: 33655-33835 bp Feature: domain Description: GIIM Note: maturase Location: 33655-33835 bp Feature: gene Location: 33868-34407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34198-34276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 198-34 276 bp Feature: gene Location: 34438-34635 bp Feature: gene Location: 34893-35798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JABWHY010000020.1 Escherichia coli strain MS6207 scf7180000000087, whole genome shotgun sequence (16969 bp)
Overview 1 RT 1: 14866-16966 bp Neighborhood of RT #1 [14866, 16966] group_II_RT_mat RVT-GII Feature: gene Location: 14866-15054 bp Feature: gene Location: 15066-15635 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15123-15381 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15 123-15 381 bp Feature: gene Location: 15936-16652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16341-16605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16341-16605 bp Feature: gene Location: 16658-16966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: JABWHY010000006.1 Escherichia coli strain MS6207 scf7180000000088, whole genome shotgun sequence (7966 bp)
Overview 1 RT 1: 2087-5339 bp Neighborhood of RT #1 [2087, 5341] RVT-GII dacD Feature: gene Location: 2087-2278 bp Feature: gene Location: 2339-2809 bp Feature: gene Location: 2806-3708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3211-3595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3211-3595 bp Feature: gene Location: 3714-3881 bp Feature: gene Location: 4175-5341 bp Feature: domain Description: dacD Location: 4178-5339 bp Feature: domain Description: dacD Location: 4178-5339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, dacD (PRK11397)