myRT

myRT report for GCA_013363415.1_ASM1336341v1

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Seq: JABWHW010000001.1 Escherichia coli strain MS6201 scf7180000000035, whole genome shotgun sequence (1573126 bp)
Overview 1 RT 1: 907453-912373 bp Neighborhood of RT #1 [907453, 912375] YccC PRK10016 RVT-GII dacD Feature: gene Location: 907453-908511 bp Feature: domain Description: YccC Location: 907459-908497 bp Feature: domain Description: YccC Location: 907459-908497 bp Feature: gene Location: 908709-909182 bp Feature: domain Description: PRK10016 Location: 908712-909177 bp Feature: domain Description: PRK1 001 6 Location: 90871 2-9091 77 bp Feature: gene Location: 909255-910742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 909660-910350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 909660-91 0350 bp Feature: gene Location: 910748-910915 bp Feature: gene Location: 911209-912375 bp Feature: domain Description: dacD Location: 911212-912373 bp Feature: domain Description: dacD Location: 91 1 21 2-91 2373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397)

Seq: JABWHW010000016.1 Escherichia coli strain MS6201 scf7180000000039, whole genome shotgun sequence (96221 bp)
Overview 1 RT 1: 8429-12890 bp Neighborhood of RT #1 [8429, 12895] umuC PRK10276 RVT-GII Rve PinE Feature: gene Location: 8429-9700 bp Feature: domain Description: umuC Location: 8432-9692 bp Feature: domain Description: umuC Location: 8432 -9692 bp Feature: gene Location: 9700-10512 bp Feature: domain Description: PRK10276 Location: 10132-10495 bp Feature: domain Description: PRK102 76 Location: 10132 -10495 bp Feature: gene Location: 10537-11535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10942-11506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10942 -11506 bp Feature: gene Location: 11560-12276 bp Feature: domain Description: Rve Location: 11575-12220 bp Feature: domain Description: Rve Location: 11575-12 2 2 0 bp Feature: gene Location: 12368-12895 bp Feature: domain Description: PinE Location: 12377-12890 bp Feature: domain Description: PinE Location: 12 377-12 890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Rve (COG3316), PinE (COG1961), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: JABWHW010000012.1 Escherichia coli strain MS6201 scf7180000000043, whole genome shotgun sequence (576538 bp)
Overview 1 RT 1: 87224-92102 bp Neighborhood of RT #1 [87224, 92104] umuC PRK10276 RVT-GII hlyE Feature: gene Location: 87224-88492 bp Feature: domain Description: umuC Location: 87227-88490 bp Feature: domain Description: umuC Location: 87227-88490 bp Feature: gene Location: 88492-88911 bp Feature: domain Description: PRK10276 Location: 88495-88909 bp Feature: domain Description: PRK10276 Location: 88495-88909 bp Feature: gene Location: 88990-90477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89395-90085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893 95-90085 bp Feature: gene Location: 90502-90888 bp Feature: gene Location: 91187-92104 bp Feature: domain Description: hlyE Location: 91196-92102 bp Feature: domain Description: hlyE Location: 91196-92102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, hlyE (PRK11376)

Seq: JABWHW010000002.1 Escherichia coli strain MS6201 scf7180000000044, whole genome shotgun sequence (1311340 bp)
Overview 1 RT 1: 1112216-1117540 bp Neighborhood of RT #1 [1112216, 1117656] HTH_38 Tra8 PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 1112216-1113367 bp Feature: domain Description: HTH_38 Location: 1112225-1112339 bp Feature: domain Description: HTH_38 Location: 1112225-1112339 bp Feature: domain Description: Tra8 Location: 1112375-1113356 bp Feature: domain Description: Tra8 Location: 1112375-1113356 bp Feature: gene Location: 1113498-1113923 bp Feature: domain Description: PHA02517 Location: 1113522-1113858 bp Feature: domain Description: PHA02517 Location: 1113522-1113858 bp Feature: gene Location: 1114515-1116038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1114788-1115520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1114 788-1115520 bp Feature: domain Description: GIIM Note: maturase Location: 1115595-1115793 bp Feature: domain Description: GIIM Note: maturase Location: 1115595-1115793 bp Feature: gene Location: 1116203-1116361 bp Feature: domain Description: PHA02517 Location: 1116206-1116326 bp Feature: domain Description: PHA02517 Location: 1116206-1116326 bp Feature: gene Location: 1116580-1117656 bp Feature: domain Description: COG3547 Location: 1116619-1117540 bp Feature: domain Description: COG354 7 Location: 1116619-111754 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: JABWHW010000009.1 Escherichia coli strain MS6201 scf7180000000046, whole genome shotgun sequence (523995 bp)
Overview 1 RT 1: 97654-102232 bp Neighborhood of RT #1 [97654, 102234] RVT-GII PRK08155 Feature: gene Location: 97654-97905 bp Feature: gene Location: 98093-98461 bp Feature: gene Location: 98486-99973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98891-99581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98891-995 81 bp Feature: gene Location: 100037-100186 bp Feature: gene Location: 100546-102234 bp Feature: domain Description: PRK08155 Location: 100549-102232 bp Feature: domain Description: PRK0815 5 Location: 1005 49-102232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08155 (acetolactate synthase large subunit), RVT-GII