myRT

myRT report for GCA_013363865.1_ASM1336386v1

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Seq: JABWGM010000024.1 Arcobacter butzleri strain RMI RMI_contig_24, whole genome shotgun sequence (39298 bp)
Overview 1 RT 1: 29040-33687 bp Neighborhood of RT #1 [29040, 33687] RVT-GII HNHc Cas4_I-A_I-B_I-C_I-D_II-B Feature: gene Location: 29040-29270 bp Feature: gene Location: 29576-29947 bp Feature: gene Location: 30150-32009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30465-31176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30465-31 1 76 bp Feature: domain Description: HNHc Note: nucleases Location: 31764-31893 bp Feature: domain Description: HNHc Note: nucleases Location: 31 764-31 893 bp Feature: gene Location: 32707-33243 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 32947-33193 bp Feature: domain Description: Cas4_I-A_I-B_I-C_I-D_II-B Location: 32947-331 93 bp Feature: gene Location: 33334-33687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Cas4_I-A_I-B_I-C_I-D_II-B (cl00641)

Seq: JABWGM010000034.1 Arcobacter butzleri strain RMI RMI_contig_34, whole genome shotgun sequence (16174 bp)
Overview 1 RT 1: 100-9254 bp Neighborhood of RT #1 [100, 9265] COG4487 dnaG group_II_RT_mat RVT-UG6 nitrilase Mod COG3943 Feature: gene Location: 100-1365 bp Feature: domain Description: COG4487 Location: 127-1342 bp Feature: domain Description: COG4487 Location: 12 7-1342 bp Feature: gene Location: 1352-2359 bp Feature: domain Description: dnaG Location: 1463-2339 bp Feature: domain Description: dnaG Location: 1463-2 339 bp Feature: gene Location: 2349-6338 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2394-2712 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 394-2 712 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 3006-3453 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 3006-3453 bp Feature: domain Description: nitrilase Location: 5640-6162 bp Feature: domain Description: nitrilase Location: 5640-6162 bp Feature: gene Location: 6402-8228 bp Feature: domain Description: Mod Location: 6591-7746 bp Feature: domain Description: Mod Location: 6591-7746 bp Feature: gene Location: 8231-9265 bp Feature: domain Description: COG3943 Location: 8249-9254 bp Feature: domain Description: COG3943 Location: 82 49-92 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4487 (Uncharacterized protein, contains DUF2130 domain ), dnaG (TIGR01391), group_II_RT_mat (TIGR04416), RVT-UG6, nitrilase (cl11424), Mod (COG2189), COG3943 (Uncharacterized conserved protein )