myRT

myRT report for GCA_013368355.1_ASM1336835v1

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Seq: WNUF01000077.1 Escherichia coli strain MEX-2 scaffold78_size2706, whole genome shotgun sequence (2706 bp)
Overview 1 RT 1: 9-2538 bp Neighborhood of RT #1 [9, 2603] RVT-GII GIIM PHA02517 Feature: gene Location: 9-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-1 01 4 bp Feature: domain Description: GIIM Note: maturase Location: 1092-1287 bp Feature: domain Description: GIIM Note: maturase Location: 1 092-1 287 bp Feature: gene Location: 2124-2603 bp Feature: domain Description: PHA02517 Location: 2184-2538 bp Feature: domain Description: PHA0251 7 Location: 21 84-2538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: WNUF01000009.1 Escherichia coli strain MEX-2 scaffold9_size166138, whole genome shotgun sequence (166138 bp)
Overview 1 RT 1: 137501-143532 bp Neighborhood of RT #1 [137501, 143532] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137501-138421 bp Feature: domain Description: AbiEii Location: 137543-138284 bp Feature: domain Description: AbiEii Location: 137543-1382 84 bp Feature: gene Location: 138408-139211 bp Feature: domain Description: AbiEi_3_N Location: 138441-138702 bp Feature: domain Description: AbiEi_3_N Location: 138441-138702 bp Feature: domain Description: AbiEi_3 Location: 138714-139170 bp Feature: domain Description: AbiEi_3 Location: 138714-139170 bp Feature: gene Location: 139506-142715 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140034-140523 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140034-14052 3 bp Feature: domain Description: nitrilase Location: 142029-142626 bp Feature: domain Description: nitrilase Location: 142 02 9-142 62 6 bp Feature: gene Location: 142876-143016 bp Feature: domain Description: Phage_ASH Location: 142903-142996 bp Feature: domain Description: Phage_ASH Location: 142 903-142 996 bp Feature: gene Location: 143062-143532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)