myRT

myRT report for GCA_013370305.1_ASM1337030v1

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Seq: JABXDC010000026.1 Escherichia coli strain ME2L-18-70 NODE_26_length_78659_cov_17.142171, whole genome shotgun sequence (78659 bp)
Overview 1 RT 1: 31601-35761 bp Neighborhood of RT #1 [31601, 35761] TIGR02646 COG3950 RVT-Retrons DinI Feature: gene Location: 31601-32161 bp Feature: domain Description: TIGR02646 Location: 31604-31952 bp Feature: domain Description: TIGR02646 Location: 31 604-31 952 bp Feature: gene Location: 32281-33915 bp Feature: domain Description: COG3950 Location: 32419-33877 bp Feature: domain Description: COG3950 Location: 3241 9-33877 bp Feature: gene Location: 33915-34850 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34017-34611 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3401 7-3461 1 bp Feature: gene Location: 35329-35562 bp Feature: domain Description: DinI Location: 35371-35557 bp Feature: domain Description: DinI Location: 35371 -35557 bp Feature: gene Location: 35573-35761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, DinI (pfam06183)

Seq: JABXDC010000027.1 Escherichia coli strain ME2L-18-70 NODE_27_length_76764_cov_16.006642, whole genome shotgun sequence (76764 bp)
Overview 1 RT 1: 61924-66216 bp Neighborhood of RT #1 [61924, 66377] cbl RVT-UG12 Phage_int_SAM_2 Integrase_1 Feature: gene Location: 61924-62874 bp Feature: domain Description: cbl Location: 61927-62872 bp Feature: domain Description: cbl Location: 6192 7-62 872 bp Feature: gene Location: 63192-63410 bp Feature: gene Location: 63602-64897 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 63953-64388 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 63953-64388 bp Feature: gene Location: 64894-65157 bp Feature: gene Location: 65466-66377 bp Feature: domain Description: Phage_int_SAM_2 Location: 65469-65739 bp Feature: domain Description: Phage_int_SAM_2 Location: 65469-65739 bp Feature: domain Description: Integrase_1 Location: 65772-66216 bp Feature: domain Description: Integrase_1 Location: 65772 -662 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cbl (PRK12679), RVT-UG12, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835)