myRT

myRT report for GCA_013370705.1_ASM1337070v1

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Seq: JABXDF010000024.1 Escherichia coli strain ME2L-18-10 NODE_24_length_69633_cov_17.076814, whole genome shotgun sequence (69633 bp)
Overview 1 RT 1: 28790-33636 bp 2 RT 2: 67689-69628 bp Neighborhood of RT #1 [28790, 33636] DUF3987 Inovirus_Gp2 RVT-GII Neighborhood of RT #2 [67689, 69630] RVT-Retrons Feature: gene Location: 28790-30223 bp Feature: domain Description: DUF3987 Location: 28883-29960 bp Feature: domain Description: DUF3987 Location: 28883-29960 bp Feature: gene Location: 31082-31645 bp Feature: domain Description: Inovirus_Gp2 Location: 31139-31580 bp Feature: domain Description: Inovirus_Gp2 Location: 31 1 39-31 580 bp Feature: gene Location: 31971-33134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32085-32772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32085-32772 bp Feature: gene Location: 33121-33429 bp Feature: gene Location: 33463-33636 bp Feature: gene Location: 67689-67883 bp Feature: gene Location: 68166-69134 bp Feature: gene Location: 69121-69630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69223-69628 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69223-69628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII, RVT-Retrons

Seq: JABXDF010000005.1 Escherichia coli strain ME2L-18-10 NODE_5_length_223165_cov_16.541159, whole genome shotgun sequence (223165 bp)
Overview 1 RT 1: 1-2968 bp Neighborhood of RT #1 [1, 2976] RVT-Retrons HTH_1 PBP2_CrgA_like_5 Feature: gene Location: 1-429 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7-190 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7-190 bp Feature: gene Location: 1023-1565 bp Feature: gene Location: 2092-2976 bp Feature: domain Description: HTH_1 Location: 2116-2290 bp Feature: domain Description: HTH_1 Location: 2 116-2 2 90 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 2371-2968 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 2 371-2 968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_1 (pfam00126), PBP2_CrgA_like_5 (cd08474)