myRT

myRT report for GCA_013371485.1_ASM1337148v1

Download annotations/find similar RTs

Seq: JABWTB010000019.1 Halomonas titanicae strain TAT1 NODE_19_length_51215_cov_251.255818, whole genome shotgun sequence (51215 bp)
Overview 1 RT 1: 2128-5501 bp Neighborhood of RT #1 [2128, 5509] HTH_21 RVT-GII PRK08195 PRK08300 Feature: gene Location: 2128-2523 bp Feature: domain Description: HTH_21 Location: 2314-2431 bp Feature: domain Description: HTH_21 Location: 231 4-2431 bp Feature: gene Location: 2663-2824 bp Feature: gene Location: 3016-3399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037-3394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037-3394 bp Feature: gene Location: 3577-4596 bp Feature: domain Description: PRK08195 Location: 3586-4588 bp Feature: domain Description: PRK081 95 Location: 3586-4588 bp Feature: gene Location: 4613-5509 bp Feature: domain Description: PRK08300 Location: 4619-5501 bp Feature: domain Description: PRK08300 Location: 461 9-5501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII, PRK08195 (4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated), PRK08300 (acetaldehyde dehydrogenase; Validated)

Seq: JABWTB010000002.1 Halomonas titanicae strain TAT1 NODE_2_length_672307_cov_221.011527, whole genome shotgun sequence (672307 bp)
Overview 1 RT 1: 358714-364957 bp Neighborhood of RT #1 [358714, 364957] DUF1819 RVT-UG5 nitrilase nitrilase KAP_NTPase Feature: gene Location: 358714-358944 bp Feature: domain Description: DUF1819 Location: 358723-358918 bp Feature: domain Description: DUF1819 Location: 35872 3-358918 bp Feature: gene Location: 359025-359189 bp Feature: gene Location: 359611-362619 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 360070-360547 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 360070-360547 bp Feature: domain Description: nitrilase Location: 361834-361969 bp Feature: domain Description: nitrilase Location: 361834-361969 bp Feature: domain Description: nitrilase Location: 362092-362518 bp Feature: domain Description: nitrilase Location: 362 092 -362 518 bp Feature: gene Location: 362858-364726 bp Feature: domain Description: KAP_NTPase Location: 362903-364034 bp Feature: domain Description: KAP_NTPase Location: 362 903-364034 bp Feature: gene Location: 364748-364957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1819 (pfam08849), RVT-UG5, nitrilase (cl11424), KAP_NTPase (pfam07693)